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Advanced Journal of Microbiology Research

8 Articles | Volume 21 (2022)
Research Article
Hamid Vaez, Alijan Tabaraei, Abdolvahab Moradi and Ezzat A. Ghaemi*
Abstract: Methicillin resistant Staphylococcus aureus (MRSA) is a main cause of nosocomial infections with consequence of increasing hospitalization, costs of treatment and rate of mortality. This study was aimed to demonstrate distribution of MRSA strains and their antibiotic resistance pattern. In this descriptive study, 185 clinical isolates of S. aureus that were collected from different infections during September 2008 to 2009 were tested by polymerase chain reaction (PCR) and micro dilution broth. All the MRSA and methicillin sensitive Staphylococcus aureus (MSSA) isolates were tested for antibiotic resistance pattern by disk diffusion method with 14 different antibiotics. Data were entered in SPSS software version 16 and analyzed by chi-square test. P value of 8 µg/ml were mecA positive. MRSA is spreading worldwide with increasing levels of resistance, and accurate and early detection of these strains is encouraged.[...] Read More.
Keywords: Staphylococcus aureus, methicillin resistant Staphylococcus aureus, methicillin sensitive Staphylococcus aureus, minimum inhibitory concentration, mecA
  2022, 21(1), 1-6; 
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Research Article
Full Length Research Paper
Abstract: This study investigates the current spoilage fruit fungi and their plant cell wall degrading enzymes of various fresh postharvest fruits sold in Jeddah city and share in establishment of a fungal profile of fruits. Ten fruit spoilage fungi were isolated and identified as follows Fusarium oxysporum (banana and grape), Aspergillus japonicus (pokhara and apricot), Aspergillus oryzae (orange), Aspergillus awamori (lemon), Aspergillus phoenicis (tomato), Aspergillus tubingensis (peach), Aspergillus niger (apple), Aspergillus flavus (mango), Aspergillus foetidus (kiwi) and Rhizopus stolonifer (date). The plant cell wall degrading enzymes xylanase, polygalacturonase, cellulase and -amylase were screened in the cell-free broth of all tested fungi cultured on their fruit peels and potato dextrose broth (PDB) as media. Xylanase and polygalacturonase had the highest level contents as compared to the cellulase and - amylase. In conclusion, Aspergillus spp. are widespread and the fungal polygalacturonases and xylanses are the main enzymes responsible for the spoilage of fruits.[...] Read More.
Keywords: Aspergillus, Fusarium, Rhizopus, fruits, xylanase, polygalacturonase.
  2022, 21(1), 1-6; 
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Short Communication
Turan Gunduz, Sedat Cumen, Ali Ari, M. Mete Demirel, Serdag Etiz and Ziya Tay
Abstract: Acute gastroenteritis is an important health public issue especially in developing countries. The aim of this study was to determine the most common microbial agents responsible for acute diarrheas in our city. The study was performed prospectively between December 2005 and January 2006 in Manisa, Turkey. Stool samples were collected from patients with acute diarrhea who attended to different hospitals of the city (University Hospital, Government Hospitals, Pediatrics Hospital and Health Public Laboratory). The stool samples of 300 patients (50 children, 250 adults) were investigated. Standard cultivation methods were performed to determine Salmonella ve Shigella spp. Escherichia coli 0157:H7 was tested by ImmunoCard STAT! E. coli 0157 Plus. The strains that were identified as sorbitol negative E. coli were investigated by E. coli 0157: H7 antiserum. The isolated microorganisms were as follows: Salmonella spp. 7 (2.3%), Shigella spp. 5 (1.6%), Giardia intestinalis 12 (4%), Enterobius vermicularis 5 (1.6%), Rotavirus 2 (0.6%) and sorbitol negative E. coli 18 (6%). Only one Sorbitol negative E. coli colony showed agglutination with E. coli 0157:H7 antiserum.The most common pathogens were identified as G. intestinalis in children and E. coli in adults. Sorbitol negative E. coli were isolated in 18 of the stool samples, and only one of them showed agglutination with E. coli 0157:H7. Although rare, this strain may lead serious complications and it should be kept in mind in patients with acute diarrhea.[...] Read More.
Keywords: Escherichia coli 0157, diarrhea, Salmonella spp., Shigella spp., Giardia intestinalis.
  2022, 21(1), 1-6; 
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Review
Kerstin Hell* and Charity Mutegi
Abstract: Aflatoxins are secondary fungal metabolites that contaminate agricultural commodities and can cause sickness or death in humans and animals. Risk of aflatoxin contamination of food and feed in Africa is increased due to environmental, agronomic and socio-economic factors. Environmental conditions especially high humidity and temperature favour fungal proliferation, but also drought conditions increase risk of aflatoxin contamination. Low-input farming practices compound fungal and aflatoxin contamination of crops. The socio-economic and food security status of the majority of inhabitants of sub-Saharan Africa leaves them few options for choosing low-risk and high quality products. Several technologies have been tested in Africa to reduce aflatoxin risk. Field management practices that increase yields can reduce the risk of aflatoxin development. They include use of resistant varieties, crop rotation, well-timed planting, weed control, pest control especially control of insect pests and avoiding drought and nutritional stress through fertilization and irrigation. Measures to stop the infection process by controlling the aflatoxin causing fungi in the field are achieved through use of pesticides and atoxigenic fungi to competitively displace toxigenic fungi, and timely harvest. Post-harvest interventions that reduce aflatoxin include rapid and proper drying, proper transportation and packaging, sorting, cleaning, drying, smoking, post harvest insect control, and the use of botanicals or synthetic pesticides as storage protectants. Another approach is to reduce the frequent consumption of ‘high risk’ foods (especially maize and groundnut) by consuming a more varied diet, and diversifying the diet into less risky staples like sorghum and millet. Chemo-preventive measures that can reduce aflatoxin effect include daily consumption of chlorophyllin or oltipraz and incorporating hydrated sodium calcium alumino-silicates into the diet. Reduction and detoxification of aflatoxin is often achieved physically (sorting, physical segregation, flotation etc.), chemically (e.g. calcium hydroxide, ammonia) and microbiologically by incorporating pro-biotics or lactic acid bacteria into the diet. Millers can use blending of less and more contaminated products to reduce the overall risk. There is need for efficient monitoring and surveillance with cost-effective sampling and analytical methods to reduce risk in Africa. Public education and awareness can sensitize the population on aflatoxin risk and its management.[...] Read More.
Keywords: Aflatoxin, Sub-Saharan Africa, control measures.
  2022, 21(1), 1-6; 
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Research Article
M. H. B. Kabir, M. M. H. Mondal, M. Eliyas, M. A. Mannan, M. A. Hashem*, N. C. Debnath, O. F. Miazi, C. Mohiuddin, M. A. Kashem, M. R. Islam and M. F. Elahi
Abstract: Epidemiology of tick infestations was studied in cattle at different upazila of Chittagong District from November, 2008 to May, 2009 to know the prevalence of ticks in relation to age, sex, breed, management of cattle, seasons of the year, topography of the area and different body parts of the host. A total number of 380 cattle were examined, of which 138 (36.31%) cattle were found infested. Three species of ticks were identified namely Boophilus microplus, Rhipicephalus sanguineus and Haemaphysalis bispinosa. The range of tick burden was 1 to 7 per four square inch of heavily infested area of Chittagong District. Mean tick burden was also high in case of B. microplus (2.77 ± 0.18) followed by H. bispinosa (1.03 ± 0.12) and R. sanguineus (0.83 ± 0.10). Prevalence was significantly (p1.5 years of age (27.80%). Infestation of tick was significantly higher (p[...] Read More.
Keywords: Epidemiology, prevalence, survey, infestation, cattle, tick.
  2022, 21(1), 1-6; 
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Research Article
P. Jayaraman*, S. NesaPriya, S. Parameshwari, S. Shyamala Priya, N. Jawahar and H. Sekar Babu
Abstract: Atropha is a potential source for production of bio-diesel and an alternative source for fossil fuels. The present study is undertaken for the analysis of storage fungi and its biodiversity in Jatropha seed samples collected from local market and research institutes in Chennai. Standard plating technique was used to study the growth of storage fungi in seeds stored for 12 to 60 months by using selective media called osmophilic media. The analysis of storage fungi in seeds with different treatments to observe as (1) surface mycoflora (2) surface invaders (3) internal fungi (4) kernel fungi. The results show that, the occurrence of different species of Aspergillus, Penicillium and Mucor species was the dominant mycoflora even from interior portion of the seeds. Among the species of storage fungi encountered, Aspergillus flavus, Aspergillus niger, Aspergillus glaucus, Aspergillus fumigatus and Penicillium species were frequently present in the order of dominance. Mucor and Rhizhopus also occur constantly in all the samples. The higher contamination of seeds with storage fungi indicates the possibility of quality losses particularly in lipid, which may affect the quality of bio-diesel. Among the different strains of A. flavus, few were found to produce aflatoxin B1. The spoilage of lipids by the named fungi, may affect the quality of bio-diesel. This study will create awareness of fungal spoilage on biodiesel seeds and for remedy to prevent the storage losses by microorganisms.[...] Read More.
Keywords: Storage fungi, Jatropha seeds, Aspergillus spp., Penicillum spp., Mucor sp., Rhizopus sp., Biodiesel, storage losses, aflatoxin.
  2022, 21(1), 1-6; 
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Research Article
Jun-Ping Shi*, Yun-Hao Xun, Yan-Xia Su, Yan-Ming Jiang, Li Zhang, Chen-Bo Hu and Jian-Gao Fan
Abstract: To investigate the prevalence of metabolic syndrome (MS) in patients with chronic viral hepatitis B (HBV) infection or non-alcoholic fatty liver disease (NAFLD), and to determine the relationship between MS and the risk of fibrosis in those patients, 136 patients with chronic HBV infections and 110 NAFLD patients were analyzed retrospectively between January 2008 and June 2009. The results showed that the prevalence of MS in the NAFLD group was significantly higher that of the HBV infection group (49.1 and 11.8%, respectively; P < 0.01). In HBV group, severity of fibrosis was associated with increased body mass index (BMI), higher aspartate aminotransferase (AST) and gamma-glutamyl-transpeptidase (GGT), severity of necroinflammation and MS. However, in NAFLD group, MS was more prevalent in patients with non-alcoholic steatohepatitis (NASH) than that of simple fatty liver (55.4 and 40%, respectively; P < 0.01). Severity of fibrosis was associated with MS, higher alanine transarninase (ALT), AST, GGT, and severe necroinflammation. We concluded that MS might be more prevalent in NAFLD patients, and associated with the severity of fibrosis in patients with chronic HBV infection or NAFLD.[...] Read More.
Keywords: Metabolic syndrome, viral hepatitis B, non-alcoholic fatty liver disease, fibrosis.
  2022, 21(1), 1-6; 
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Research Article
Full Length Research Paper
Abstract: The aim of this study was to investigate Epstein-Barr virus (EBV) serology and EBV DNA in the patients with bone marrow transplantation. In the current study, 128 patients with bone marrow transplantation (BMT) were included in Hematology-Oncology Department of Medical Faculty, Erciyes University between June 2005 and October 2009. In order to evaluate EBV serology and DNA, 357 samples obtained from the patients were studied with enzyme-linked immunosorbent assay and real-time polymerase chain reaction (PCR). The components of EBV serology were anti-Ebstein-Barr nuclear antigen (EBNA)-1 IgG, anti- viral capsid antigen (VCA) IgG and IgM. EBV seropositivity was found in 98.4% of the samples. EBV DNA positivity was detected in 13.3% of the patients. High viral load was only seen in one patient among all the EBV DNA positivity. No patient showed any symptoms regarding EBV virus and admitted with post-transplant lymphoproliferative disease. In conclusion, for the diagnosis and follow up of EBV infections in patients with BMT, detection of EBV DNA by PCR method is also beneficial in addition to serological tests regarding EBV.[...] Read More.
Keywords: Epstein-Barr virus, serological markers, real-time PCR, bone marrow transplant recipients.
  2022, 21(1), 1-6; 
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