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文章
Grace Rinmecit Pennap*, Aliyu Yakubu, Odula Oyige and Joseph Forbi
Abstract: Hepatitis B (HBV) and hepatitis C (HCV) virus infections have remained recurring decimals in blood transfusion, vertical transmission, liver cirrhosis and hepatocellular carcinoma (HCC). Most of the published studies of their prevalence in Northern Nigeria are among HIV/AIDS patients. The need for such vital information among an apparently healthy population was the basis for this study. Rapid diagnostic tests were used to screen for HBsAg and anti-HCV antibodies among people of a local community in Northern Nigeria. Of the 113 volunteers screened, 15(13.2%) were positive for each of the viruses while 10(8.85%) were found to be coinfected with the viruses. The gender related prevalence of HBsAg was 9.5% in females and 24.1% in males. Anti-HCV was reactive in 16% of the females and 3.4% of the males. Coinfection was 10.3 and 8.33% for males and females, respectively (p > 0.05). Age related prevalence for HBsAg was 13.8 and 11.5% among those aged 1 - 40 years and above 40 years, respectively and similarly 12.6 and 15.4% for anti-HCV antibodies, respectively. Coinfection was 8.0% among those aged 1 - 40 years old and 11.5% among those that were older. There was no statistically significant association between age, and presence/absence of facial/body marks with viral infection (p > 0.05). This study revealed 13.3% of apparently healthy individuals harbouring each of the viruses (HBV and HCV) and also a relatively high prevalence of coinfection (8.85%). This finding is a cause for alarm.[...] Read More.
Keywords: HBV, HCV, prevalence, infection, coinfection.
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文章
Liew Yun Khoon and Vasanthakumari Neela*
Abstract: Presence of secreted proteins is the key for sustenance of Staphylococcus aureus strains in the host system. General secretory (Sec) system is a well known and major secretion system that is responsible for the transportation of exoproteins across the bacterial cytoplasmic membrane and cell wall. In order to define the secretome of S. aureus, the availability of combination of two-dimensional gel electrophoresis (2-DE) with the latest advanced techniques (MALDI-TOF and ESI-MS/MS) has provided a powerful tool for the investigation of a large number of protein spots with the aim of identifying new drug candidates and discovering new diagnostics tools. In this paper, we present a short review regarding S. aureus general secretory system and role of secreted protein in host cells, and discuss the proteomic, together with genomics of S. aureus.[...] Read More.
Keywords: Staphylococcus aureus, secretome, general secretory system, pathogenesis, proteomic.
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文章
Mojtaba Moosavian* and Davoud Darban
Abstract: Staphylococci are important organisms involved in many infections, including bacteremia or septicemia. Repetitive sequence–based PCR (rep-PCR) is a useful method for detection of staphylococcal DNA fingerprint patterns, especially when the origins of these organisms are unknown. Staphylococcal positive blood cultures were collected from patients with bacteremia hospitalized in four hospitals. The patients who had two positive blood cultures out of three samples were considered as subjects. After isolation of staphylococci on blood agar medium, the species of isolates were determined by standard biochemical tests. DNA was extracted from bacterial cells and genomic fragments were amplified by rep-PCR. Furthermore, relationship of strains was determined based on the similarities between DNA fingerprints by using Jaccards coefficient. In this survey, 88 cases of bacteremia caused by coagulase positive Staphylococcus aureus (36 cases), and coagulase negative strains (52 cases), were studied. Extracted DNA from staphylococcal isolates generated multiple fingerprints in sizes ranging between 600(61%) and 2642 bp (87.5%) by rep-PCR method. The fingerprint patterns of S. aureus (33 strains), S. epidermidis (32 strains) and S. lugdunensis (7 strains) were 31, 30 and 7 types, respectively. This study demonstrated only a few of Staphylococci strains that displayed similarity or that are closely related in the DNA fingerprint patterns. We concluded that rep-PCR is a rapid, simple and suitable method for epidemiological studies. The results of our study also showed that most of Staphylococci isolated from bacteremic patients produced "different" genomic fingerprint patterns by rep-PCR and so, at present study, dissemination source of infection is different.[...] Read More.
Keywords: rep-PCR, fingerprint patterns, Staphylococci, bacteremia.
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文章
Hongbo Ma, Yunpeng Diao, Danyu Zhao, Kun Li* and Tingguo Kang*
Abstract: Currently, a pandemic swine influenza A virus infection causes a huge negative impact on human beings all over the world. However, the methods of treatment are not satisfactory, therefore it is urgent for us to set up new theory and practice to fight against the intractable virus. Terminalia chebula Retz, as a kind of traditional Chinese medicine, widely distributes and has multiple pharmacological effects. Evidences in laboratory and clinic practice confirm us to the potential of Terminalia chebula Retz inhibiting influenza A virus infection. We thus hypothesize that acetone extracts (tannic acids, A) of Terminalia chebula Ret may as a new alternative treat influenza A infection based on holistic concept of traditional Chinese medicine principle.[...] Read More.
Keywords: Swine influenza A virus, Terminalia chebula Retz, hypothesis.
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文章
V. O. Adetunji
Abstract: Three strains of Escherichia coli 0157:H7 and eleven strains of Listeria monocytogenes isolated from West African wara cheese were analysed for cellulose production, fimbriae formation, zetapotential and biofilm formation which are of relevance in food processing. E. coli c produced no fimbria, very low cellulose and significantly lower zetapotential (-3.1) among the three strains. The L. monocytogenes (b) had the highest zetapotential (-39.1) and cellulose production at 24 h of incubation. Next to it was L. monocytogenes (f) which also had a higher cellulose production at 72 h incubation. A positive correlation exists between zetapotential and cellulose production in the E. coli strains (R2 = 0.67) while Listeria monocytogenes strains gave a negative correlation (R2 = -0.08) . There was no significant difference in biofilm formation in the L. monocytogenes strains (P < 0.05), however the L. monocytogenes (a) had the highest at 48 h incubation. Weak positive correlation (R²) values of 0.0397, 0.002 and 0.0011 were obtained for 24, 48 and 72 h incubation for Listeria monocytogenes counts (cfu/ml) and cellulose measurements. This study further accentuate and confirmed the presence of E. coli and L. monocytogenes with virulent factors that of relevance to the method of processing in West African soft cheese. The need for an improved hygiene during processing and sale of this product to prevent the transmission of these pathogenic organisms to humans is therefore emphasized.[...] Read More.
Keywords: West African soft cheese, Escherichia coli, Listeria monocytogenes, virulent strains.
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文章
Temitope O. Oguntade* and Adedotun A. Adekunle
Abstract: Fresh visually healthy seeds of Zea mays (maize), Cucumeropsis mannii (melon) and Phaseolus vulgaris (bean) were stored under three conditions, wood ash of some tropical forest trees in Nigeria namely; Khaya grandifoliola, Nauclea diderrichii, Piptadeniastrum africanum, Mangifera indica, Mansonia altissima, Triplochiton scleroxylon, Ceiba pentandra, Terminalias superba, Terminalia ivorensis). Seeds treated with benlate, an orthodox fungicide and seeds without any treatment to serve as the control of the experiment. These were set -up at two different locations on the campus (the laboratory and the botanic garden) for six months. The seeds stored with ashes of Nauclea diderrichii and Piptadeniastrum africanum were the most effective, stopping fungal growth and eliminating weevils compared to those seeds stored with benlate which is only effective against fungal growth. P. vulgaris (bean) seeds are the best stored of the three seeds probably due to the low moisture content of the seed. Four pathogenic fungi were isolated from the seeds (maize, melon and bean) at both locations and these include; Aspergillus niger, Aspergillus flavus, Aspergillus fumigatus and Rhizopus racemosa. Preliminary phytochemical screening revealed that some of these ashes contained a number of active compounds which enable them (ashes extracts) to inhibit the growth of the pathogenic fungi.[...] Read More.
Keywords: Seeds, storage fungi and wood-ash.
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文章
N. F. Tanih, L. M. Ndip, A. M. Clarke, R. N. Ndip,*
Abstract: Helicobacter pylori induces chronic gastritis, the strongest known risk factor for peptic ulcer disease, distal gastric cancer and a number of extra gastric related morbidity. More than 50% of the world’s population is infected with this organism lifelong without effective bacterial eradication. Clinical sequelae are dependent upon bacterial virulence factors and host genetic diversity, particularly within immune response genes. The organism is able to evade the harsh acidic environment in the gastric mucosa and host immune response by elaborating a number of factors that aid in the achievement of its persistent colonization. H. pylori possess numerous virulence proteins (cagA, vacA and iceA) and enzymes (urease, catalase, lipase, phospholipase and proteases) with substantial genotypic diversity, which engenders differential host inflammatory responses that influence the pathologic outcome. The hallmark of H. pylori infection is a marked inflammatory response with the infiltration of various immune cells into the infected gastric mucosa; with a polarized Th1 immune response which further attracts inflammatory cells to the gastric mucosa leading to damage. Knowledge on H. pylori reservoirs and transmission remains elusive. However, studies have described the gastro-oral, oral-oral and faecal-oral as possible routes of acquisition and transmission. This paper provides an understanding of H. pylori persistence and pathogenesis as well as its route of transmission.[...] Read More.
Keywords: Helicobacter pylori, pathogencity, virulence factors, epidemiology, risk factors, immune evasion.
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文章
Hassan Momtaz*, Elahe Tajbakhsh, Behnam Abbasian and Manochehr Momeni
Abstract: Mastitis is one of the common diseases of dairy cattle and an inflammatory response of the mammary glands tissue. Mastitis causes considerable loss to the dairy industry. Among several bacterial pathogens that can cause mastitis, S. aureus is probably the most lethal agent because it causes chronic and deep infection in the mammary glands that is extremely difficult to be cured. The present study was to detect agr group genes in the S. aureus isolated from 360 mastitis milk samples in Chaharmahel va Bakhtiari and Isfahan provinces of Iran via PCR by using specific primers. Among 360 milk samples, 86 samples contained 1250 bp fragment of the 23srRNA gene, 10 samples contained agrI gene, 42 samples contained agrII gene, 19 samples contained agrIII gene and 15 samples contained agrIV gene.[...] Read More.
Keywords: Bovine mastitis, S. aureus, agr group genes, PCR, Iran.
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文章
Fu Xiao Shen, An Chun Cheng, *, Ming Shu Wang, Hai Bin Huang, Chuan Feng Li, Jin Feng Jiang, Ren Yong Jia, De Kang Zhu, and Xiao Yue Chen
Abstract: The aim was to identify the factors affecting synonymous codon usage bias in the newly discovered gC gene of duck plague virus (DPV) CHv strain and a comparative analysis of the codon usage bias in the gC genes of 27 other reference herpesviruses was performed by using CAI, CHIPS and CUSP program of EMBOSS. The results showed that base composition, mutational bias and natural selection were the major determinants of the codon usage variation in the DPV gC gene. The primary codon usage trends in the DPV gC gene showed obvious difference with a strong bias towards the synonymous codons with A and T at the third codon position. Characterization of nucleotide composition in the DPV gC gene was related to dinucleotide usage bias characterized by the variation of CpG islands. The ENc-plot and GC12s-GC3s revealed that the genetic heterogeneity in the gC genes of the 28 herpesviruses were constrained by G + C content. Moreover, the phylogenetic analysis demonstrated that codon usage patterns of the DPV gC gene were phylogenetically conserved and similar to the gC genes of the avian alphaherpesvirinae. Furthermore, comparisons of the codon preferences in the DPV gC gene with those of Escherichia coli, yeast and human revealed that there was a statistically positive correlation between DPV and yeast (r = 0.646, P < 0.05) . The above results could provide useful information for the synonymous codons usage bias of the DPV gC gene and promote the relevant mechanism for evolution, pathogenesis and functional studies in the area of DPV research and possibly studies with other herpesvirus viruses.[...] Read More.
Keywords: Duck plague virus (DPV), gC gene, codon usage bias.
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文章
Nipun Silawat*, Shweta Chouhan, Pramod Sairkar, R. K. Garg, Neetu Vijay and N. N. Mehrotra
Abstract: In this research study, three samples were collected from the T.S. Murthi Udhyan, Obedullahganj out of which two samples were from agriculture field soil and the third sample was from compost. Pure cultures of bacteria were isolated by using serial dilution and spread plate methods. The isolated bacterial cultures were separated according to the morphotypes and then bio-chemically tested. They were further identified with the help of bacteria identification program (PIBWin 2007). The identified bacterial cultures are Achromobacter group F, Acinetobacter calcoacet, Pseudomonas aeruginosa, P. malli, P. putida, P. cepacia, P. shutzeri, P. pseudomalli, P. malli and P. pickettii. The value of Simpson’s index (D) is 0.09, which represented high diversity. Isolated bacteria were inoculated in micro titer plates and Niche overlap index (NOI) was calculated after two days of inoculation. The results of study indicate that direct incubation of samples in micro titer plates produces patterns of metabolic response useful in the classification and characterization of microbial communities. Principal component analysis of colour responses quantified from digitized images of plates revealed distinctive patterns among microbial habitats and spatial gradients within soil and compost sites. Correlation of the original carbon source variables to the principal components gives a functional basis to distinctions among communities. Intensive spatial and temporal analysis of microbial communities with this technique can produce ecologically relevant classifications of heterotrophic microbial communities.[...] Read More.
Keywords: Microdiversity, compost, sole source carbon utilization, testing.
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