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S. Bragadeeswaran*, R. Jeevapriya, K. Prabhu, S. Sophia Rani, S. Priyadharsini and T. Balasubramanian
Abstract: The aim of the study was to isolate the exopolysaccharides (EPS) from the active biofilm bacterium Bacillus cereus GU 812900 which was isolated from the stainless steel test panel and deployed in the Vellar estuary for a period of about four weeks. The deployed stainless steel test panels when analyzed revealed a direct relationship between the rate of corrosion and the concentration of EPS that is, the rate of corrosion increased with an increase in the concentration of EPS and the period of immersion. Growth and EPS production by B. cereus strain GU812900 was studied in a basalt salt solution (BSS) containing (g/1); NaCl, 30.0; KCl 0.75; MgSO4.7H2O, 7.0; NH4Cl, 1.0; K2HPO4, 0.7; KH2PO4. 0.3; glucose, 10.0 and 1 ml of trace metal solution. The rate of EPS production in batch cultures was highest during the late log phase of the growth then stationary phase. The EPS was recovered from the culture supernatant by using ethanol precipitation – dialysis procedure. Chemical composition of EPS revealed that it is primarily composed of natural sugars, proteins, phosphates and sulphates. The EPS production was influenced by carbon, nitrogen and phosphate concentrations in the growth medium. EPS produced by B. cereus GU812900 is a heteropolysaccharide which influence the corrosion. The FTIR analysis revealed the functional groups of the EPS. The results of the study was expressed the relationship between biocorrosion and biofilm formation of the stainless steel test panels. Key  words:  Biofilm,  exopolysaccharides  (EPS),  sequencing,  secondary  metabolite,  characterization, FTIR analysis.[...] Read More.
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Full Length Research Paper
Abstract: In our previous studies, Rat-1 cells treated with Vibrio parahaemolyticus thermostable direct hemolysin (TDH) developed morphological changes including shrinkage and rounding of the cells. Such alterations suggest that TDH stimulates reorganization of the cellular cytoskeleton. In the current study, the effects of TDH on actin cytoskeleton, chromatin, and caspase-3 were evaluated. Rat-1 cells treated with TDH 5 µg/ml showed redistribution of actin with loss of stress fibers, a floccular staining pattern, cellular membrane blebbing, and cell rounding as assessed by fluorescent actin-staining. This actin redistribution was time dependent. Actin was rapidly disappeared within 10 min after TDH exposure, and the maximal effect was detected by 30 min. TDH-treated cells also showed chromatin condensation which is time dependent. The changes were also detected by as early as 10 min, with the maximal effect by 20 min. Moreover, caspase-3 was activated in TDH-treated Rat-1 cells by time-dependent manner. Pretreatment with a caspase inhibitor (ZVAD-FMK) partially reduced the activation of caspase-3 in the TDH-treated cells. All of the changes found in this study appear to be linked, and the findings, especially activation of caspase-3 in TDH-treated Rat-1 cells, provide a new insight into TDH-mediated cytotoxicity.[...] Read More.
Keywords: Thermostable direct hemolysin (TDH), Vibrio parahaemolyticus, Rat-1 cells, actin disruption, caspase-3 activation, chromatin condensation.
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Majid Sadeghi*, Mohammad Hasan Bozorgemehrifard, Hadi keyvanfar, Hassan Momtaz, Abdolhamid Shooshtari and Saied Charkhkar
Abstract: Avian infectious laryngotracheitis (ILT) is a severe clinical respiratory disease of chickens and causes the clinical symptoms of difficulty in breathing and bloody coughing and as if involves laying hens affect the egg production. Two different regions of the infected cell protein 4 (ICP4) gene of infectious laryngotrucheitis virus (ILTV) were amplified and sequenced for characterization of field isolates and tissue culture-origin (TCO) and chicken embryo-origin (CEO) vaccine strains. Phylogenetic analysis of the two regions showed no differences in nucleotide and amino acid sequences between Iranian field isolates with high morbidity and nearly 30% mortality and CEO attenuated vaccines. These findings suggest that modified-Live (ML) ILT vaccine viruses may increase in virulence after bird-to-bird passages.[...] Read More.
Keywords: Avian infectious laryngotracheitis, infected cell protein 4, phylogenetic analysis.
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Iniya Kumar*, M. A. Ramalakshmi, U. Sivakumar, P. Santhanakrishnan and Xinmin Zhan
Abstract: Biodiesel is an alternative renewable fuel and its production rises rapidly. Microbial oils produced by oleaginous microorganisms can be used as a feedstock for biodiesel production so as to sustain the increasing demand for biodiesel and alleviate the competition with the food supply. This study investigated oil production by an oleaginous fungus, Mortierella sp., which was isolated from soils of Tamil Nadu in India. The flask culturing experiment shows that the optimal lipid production conditions were glucose as the carbon source (0.16 M), yeast extract (one percent) as the nitrogen source, temperature at 30°C and pH of 6.5. Under the optimal conditions, the oil production potential of Mortierella sp was examined in a three-litre pilot-scale fermentor. The fungus accumulated 44.1% of lipids in dry biomass and the biomass growth was 15.9 g l-1. The fungal oil contained oleic acid of 38.2%, stearic acid of 11.5%, linolenic acid of 4.8% and palmitic acid of 19.6%, and its fatty acid composition was similar to that of vegetable oils. The crude oil had properties: density of 920 Kg/m3 at 15°C, viscosity of 54.81 mm2/s at 40°C, flash point of 218°C, pour point of 7.0°C, water content of 3.9%, ash content, 0.62%, carbon residue of 0.082%, acid value of 28.22 Mg KOH/g, calorific value of 32.05 MJ/Kg, free fatty acid of 14.55, and fire point of 230°C. The oil properties were much similar to Jatropha oil and rapeseed oil.[...] Read More.
Keywords: Biodiesel, microbial oil, Mortierella sp, oleaginous fungi.
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Nighat Naheed*, Nazia Jamil and Shahida Hasnain
Abstract: Polyhydroxyalkanoates (PHA) are the biodegradable polyesters produced by bacteria to overcome the environmental stress. Contaminated environments have a large number of bacteria which can accumulate PHA as their energy reserves. Molasses, oil/ghee and sewerage contaminated soils were selected for the screening of biodegradable plastic- producing bacterial strains. The selected contaminated environments showed great diversity of bacterial flora, PSEUDOMONAS (39.39%) being the most common. The 54 bacterial isolates were further screened by Sudan Black B staining after 48 h of incubation on polyhydroxyalkanoates (PHA) - detection media with glucose as a carbon source and Nile Blue A viable colony staining method. The PHA granules could not be detected in 6 bacterial isolates (AS1, AS2, AP2, AP1, LS13 and VM1). In soil samples contaminated with molasses (sugar industry waste), 95% and in samples contaminated with oil/ghee industry waste all bacterial isolates showed PHA accumulation ability. The accumulated PHA was extracted by direct addition of sodium dodesyl sulphate (SDS). The bacterial isolates SM5, SM11, PG5, UOS2, LS10, AP4 and LS3 accumulated more than 50% PHA of their wet cell mass. No correlation was observed between bacterial growth and the PHA production. The bacterial strains showed multiple resistant markers for selected antibiotics (penicillin and streptomycin) and heavy metals (copper and cadmium). A high level of resistance was observed for penicillin (100 - 4500 µg/ml) and copper (1.5 - 17 mM/ml) in PHA- producing strains.[...] Read More.
Keywords: Biodegradable plastic, polyhydroxyalkanoates, molasses, oil/ghee, contaminated soil.
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Full Length Research Paper
Abstract: Soil reaction (pH) is important property soil for crop productions. Many chemicals as ameliorates are required to make soil productive. In organic agriculture, bio-ameliorates are prerequisite. Rhizobia are acid producers and Bradyrhizobia are alkali producers. Rhizobia and Bradyrhizobia are used as ameliorate to study their impact on soil reaction (pH) in laboratory conditions for 21 days. It was observed that Rhizobia decreased soil pH and Bradyrhizobia increased soil pH during incubation.[...] Read More.
Keywords: Acid producers, alkali producers, brardyrhizobia, soil pH, rhizobia.
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Full Length Research Paper
Abstract: RHIZOCTONIA SOLANI is one of the most important soil-borne fungal pathogens that attack the roots of plant and causes significant damage to different plants particularly to chickpeas (CICER ARIETINUM L.). The aim of this work is to study the antagonistic activity of different RHIZOBIUM strains against R. SOLANI in dual culture IN VITRO and under greenhouse conditions. The benefits of rhizobial inoculant in nitrogen fixation, phosphorous uptake and on plant growth promoting were demonstrated with 42 RHIZOBIUM strains. Among the 42 strains tested, 24 isolates had effective control on R. SOLANI IN VITRO. In order to study the biological control mechanisms, the RHIZOBIUM strains ability to produce volatile compounds and to solubilise phosphate were investigated. The results showed that 10 strains were able to solubilise phosphorus and 13 strains produced volatile compounds. In pot trials, the percentage of chickpea plants inoculated with different rhizobia showed significant reduce of root rot symptoms compared to the control growing in uninoculated soil. Among these rhizobiums, the strain S27 proved efficient against the soil borne pathogen IN VITRO and in pot experiments. Our study suggested that inoculation with specific RHIZOBIUM exerts significant disease suppress against R. SOLANI in controlled conditions.[...] Read More.
Keywords: Rhizobium, Rhizoctonia solani, chickpea, plant growth promotion, biological control.
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Lin Ning and Feng-Biao Guo*
Abstract: Predicted highly expressed (PHX) genes were analyzed in five human pathogens with significant translation selection measured by within-group correspondence analysis (WCA). Functional analysis showed that in the five genomes PHX genes involved in protein synthesis, constitute the largest functional category, followed by categories of energy metabolism and protein fate. The gene encoding pyruvate kinase involved in glycolysis was PHX gene in most genomes except Bacillus anthracis Ames, which preferred strictly aerobic environment. Special PHX genes were also found, such as genes encoding phosphotransferase (PTS) system mainly appeared in Streptococcus pneumoniae genome. The analysis of virulence factors indicates that only a few pathogenicity-related genes were predicted as PHX. This is contrary to previous observations of phytopathogens, where most virulence related genes were PHX. The PHX genes may provide potential drug targets for the design of new bactericide. Specially, PHX virulence factors may help for the understanding of the crucial mechanism of virulence of the bacterial pathogens when invading human body.[...] Read More.
Keywords: Highly expressed genes, human pathogen, E(g) measure, CAI; virulence related genes, inorganic pyrophosphatase.
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Yi-Ren Jiang, Zhen-Hua Deng, Sheng-Lin Shi, Rui-Sheng Yang, Yan-Zhuo Li, Yu-Xi Duan* and Li Qin*
Abstract: Nosema pernyi is the lethal pathogen of pebrine disease in Antheraea pernyi. We have developed a PCR-based method for detection of N. pernyi using specific primers. The primers were designed by the reported conserved regions of microsporidian SSU rRNA. When the genomic DNA of N. pernyi was used as the DNA template, the specific DNA sequences were amplified by PCR. It was observed that PCR diagnosis of N. pernyi using the three sets of primers provided increased specificity and sensitivity when compared with light microscopy.[...] Read More.
Keywords: Nosema pernyi, Antheraea pernyi, pebrine disease, spores, PCR, detection.
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Shangling Fang, Hong Liu , JiangBo Wang and MaoBin Chen*
Abstract: Penicillium sp. was isolated from Daqu as a beginner strain. In order to investigate the role of Penicillium sp. in Luzhou-flavor liquor, Penicillium sp. was operated in Koji seeds and then simulated solid-state fermentation for liquor testing under different conditions. They included adding of different amounts of koji seeds and Daqu. The results showed that, when the amount of Daqu added was 20%, Penicillium sp. koji added increased from 0.5 to 2%, compared to blank control group. Liquor yield was reduced by 2.23% from 29.77%, total ester decreased by 1.70% from 37.25%, total acid increased by 6.57% from 12.41% and four esters had different degrees of decrease trend. While the amount of koji seeds added exceeded 1.0%, ethyl lactate content was higher than ethyl caproate content. When the amount of Penicillium sp. koji added was 1.0%, yield of liquor, total esters, total acid and the four esters were all enhanced with the increase in amount of Daqu.[...] Read More.
Keywords: Penicillium sp., Daqu, Koji seeds, Luzhou-flavor liquor.
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