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文章
Yong Zhong Lu* and Jie Liu
Abstract: As one of the most successful groups of microalgae in the contemporary ocean, diatoms are of ecological, biotechnological and evolutionary significance. Recent research has revealed for the first time the presence of functional silencing machinery in diatoms. Nevertheless, no microRNAs (miRNAs) participating in their gene regulation have been reported. Based on the principle of sequence conservation, previous known plant miRNAs were blasted against the expressed sequence tag databases of the marine diatoms Phaeodactylum tricornutum and Thalassiosira pseudonana and according to a series of filtering criteria, 6 conserved miRNAs were identified and 5 potential target genes of them were subsequently predicted. Alignmental and phylogenetic analyses showed that the miRNA precursor sequences were unexpectedly poorly conserved and distantly related to other family members. Above all, the findings from this study will contribute not only to further research of miRNAs features and regulatory mechanisms in diatoms, but also to their evolutionary research by virtue of new molecular tools.[...] Read More.
Keywords: Diatom, microRNA, evolution, bioinformatics.
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文章
Atieyeh Taherian Fard, Fariha Hasan, Mojgan Bandehpour , Nariman Mosaffa, Fatemeh Mashhadi Abbas, Abdul Hameed, Aamer Ali Shah and Bahram Kazemi*
Abstract: Pathogenic clostridia produce exocellular toxins that resemble lipoteichoic acid and are described as super antigens. These toxins stimulate T-cell receptor-carrying lymphocytes in peripheral blood and have been used to study immunodeficiency diseases and cancers. The CPE C -terminal region from one of the local type A strain was cloned in the pET32a vector its expression induced with IPTG. The expressed protein was purified by Ni-NTA affinity chromatography and tested for biological activity with Vero cells assay. This region of Clostridium perfringens enterotoxin (CPE) has a predominant ligand-binding activity. In the present study, the biological activity of the C-terminal region of local purified CPE came under study with Vero cell assay, guinea pig skin test and mouse test to evaluate for future use as a therapeutic purpose. The result of this study showed that, the study’s local purified C -CPE had cytotoxic activity in Vero cells even at the minimum dilution of 0.625 ng after a 4-h incubation period. It caused transient increase in capillary permeability in guinea pigs. C- CPE did not have systemic effect on Balb/c mice. The use of the C-CPE peptide may provide a novel way to target drugs to Claudine-expressing cells.[...] Read More.
Keywords: Cloning, gene expression, Clostridium perfringens enterotoxin (CPE), vero cells, nigrosin, guinea pig skin test, mouse test, Claudine.
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文章
K. S. Intisar, Y. H. Ali, A. I. Khalafalla, K. M. Taha and Mahasin E. A. Rahman
Abstract: The incidence of adenovirus type 3 infections in camels in Sudan was studied. Lungs of Camel with pneumonia lungs (n = 239) were collected from slaughter houses at four different areas in Sudan. Adenovirus type 3 antigen was detected in 1.3% of 239 tested camel lungs by the use of sandwich ELISA. Specimens from Northern (3.3%) and Central Sudan (1.2%) were found to be positives. Direct fluorescent antibody test (FAT) was used to confirm the adenovirus ELISA positives; all ELISA positives were found to be positive using FAT. Seroprevalence of adenovirus type 3 was investigated, camel sera (n = 260) were collected from the same areas in Sudan. Collected sera were examined for adenovirus antibodies using indirect ELISA. The overall detected seroprevalence was 90%; highest prevalence was in South Central (100%) then Western (94.3%) and Central Sudan (92.5%). The lowest seroprevalence was in Northern Sudan (80%). The most detected degree of positivity was +3 then +5. This represents the first report for the detection of adenovirus type 3 antigen and antibodies in camels in Sudan. It was noticed to cause pathologic effect in camel lungs.[...] Read More.
Keywords: Camel, Adenovirus 3, ELISA, Sudan.
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文章
A. Osho*, O. O. Mabekoje and O. O. Bello
Abstract: Effluent samples from two top Nigerian food and beverage industries, swords food industry and 7-Up Bottling Company, Ibadan, Oyo State, Nigeria were investigated for microbial loads, physiochemical properties and presence of heavy metals. While repeated sampling revealed two bacteria and a fungus from the effluents of 7-Up bottling company, 15 bacteria and 5 fungi were isolated from Swords foods Industry. The biochemical oxygen demand (BOD) and chemical oxygen demand (COD) were equally higher in the effluent of sword food industry than that of 7-Up bottling company. Heavy metals analyses revealed Lead (4.83 and 6.75 mgl-1) Copper (3.80 and 3.93 mgl-1), Iron (3.10 and 3.45 mgl-1), Cadmium (7.20 and 8.10 mgl-1) and magnesium (5.68 and 9.38 mgl-1) in sword food industry while Lead (0.12 and 0.14 mgl-1), copper (1.20 and 1.22 mgl-1), iron (1.60 and 1.63 mgl-1), cadmium (0.10 and 0.09 mgl-1) and magnesium (1.10 and 1.20 mgl-1) were the concentrations in 7-Up bottling company. The conclusion was that, there is a high probability of polluting the environment by sword food industry as a result of discharge of untreated wastewater into the water body or soil that may lead to death of crops or reduction in crops yield, contamination of drinking water supplies and/or accumulation and dissemination of toxic chemicals that may further endanger ecosystems and threaten public health.[...] Read More.
Keywords: Microbial loads, heavy metals, physicochemical properties.
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文章
Gao-Qiang Liu,*, Qin-Lu Lin, Xian-Chun Jin, Xiao-Ling Wangand Yan Zhao
Abstract: Sixty-one isolates including molds, yeasts and bacteria from the forest soils collected from Hunan Province, China were tested for their potentiality to accumulate microbial lipid as alternative sources for biodiesel production. The results showed that sixteen mold isolates were potential oleaginous microorganisms, among which, strain SCIM 3.009 was the best lipid producers, which may accumulate up to 50.4% of lipids in dry biomass. Further study showed that the components profile of the lipid from strain SCIM 3.009 had the similar characters to that of vegetable oil, abundant in low degree unsaturated long chain fatty acid (C18:1) and saturated long chain fatty acids (C16:0), suggesting the lipid is a potential source for biodiesel production. Based on the morphology and a commercial identification system, the strain SCIM 3.009 was found to be Thamnidium ctenidium. To enhance the lipid production by the strain, the fermentation parameters were optimized, the optimium conditions were as follows: glucose as carbon source with initial concentration 60 g/L, NH4NO3 as nitrogen source at 3.0 g/L, culture temperature was 30°C, initial pH = 6.5, culture volume was 50 mL in a 250 mL flask, agitation speed was 220 rpm. Results on verification of the optimium conditions in a 5 L stirred-tank bioreactor reveal that the strain accumulate up to 66.02% of lipids in dry biomass and the lipid yield significantly enhanced from 6.4 ± 0.39 to 13.6 ± 0.37 g/L, while biomass enhanced from 12.7 ± 0.72 to 20.6 ± 0.52 g/L.[...] Read More.
Keywords: Biodiesel, microbial lipid, oleaginous microorganism, strains screening, submerged fermentation.
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文章
Elahe Tajbakhsh*, Hassan Momtaz, Manouchehr Momeni and Sodabe Hamedi
Abstract: Hepatitis B virus, a common cause of viral hepatitis, consumes a large portion of health resources in developing countries. Hepatitis B virus (HBV) prevalence has been decreased dramatically in Iran population during the last decade, and now it is classified as having low endemicity for hepatitis B infection. Improvement of the people’s awareness about HBV risk factors, national vaccination program since 1993 for all neonates, and vaccination of high risk groups could be the cause of this decrease. In this investigation, we announce the detection of HBV- DNA sequence from 90 HBsAg positive blood donors in shahrekord by nested PCR, using specific primers of the surface antigen region of the HBV genome. Of the 11472 volunteer blood donors admitted to Shahrekord blood transfusion organization center in Iran during 2007 - 2008, 90 specimens were positive for HBsAg. From 90 HBsAg positive serum samples, 75 specimens were positive in PCR.[...] Read More.
Keywords: Blood donors, HBsAg positive, Hepatitis B, Iran, PCR, Shahrekord.
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文章
Chuma C. Okoro
Abstract: Microbiological and Physicochemical survey was undertaken in produced water and its receiving environment with the aim of verifying the likely impacts of produced water constituents on the immediate receiving marine near shore shallow environment. The sampling was carried out in two seasons, late wet season and late dry season. The results obtained indicate that the chemical constituents of the discharged produce water are capable of sustaining microbial growth and proliferation. Produce water from Escravos tank farm had relatively moderate concentrations of hydrocarbon utilizing microorganisms and sulphate reducing bacteria and the concentration of these organisms were much higher at the point of discharge of the produced water. Physicochemical analysis showed that Produce water had lower salinity and sulphate levels than the receiving marine water but the reverse was the case with the BOD, COD and Hydrocarbon constituents. The two seasons under investigation showed similar results. From the analytical data, it can be advanced that the impacts of produced water microbial flora on the receiving environment is limited to the vicinity of the discharge point of about 100 m in diameter and also to some extent up to a distance of 500 m upstream along the direction of flow of produced water discharges. It is expected that while the hydrocarbon degrading microorganisms plays a beneficial role of degrading and detoxifying abundant produced water hydrocarbons in the sediment and the surface water, Sulphate reducing bacteria might at the same time be playing a detrimental role of oxidizing certain organic compounds or hydrogen and reducing sulphate and other reduced sulphur compounds in the marine water and sediment to hydrogen sulphide which can be very toxic to bacteria, aquatic animals and man.[...] Read More.
Keywords: Produced water, sulphate reducing bacteria, hydrocarbon utilizing bacteria.
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文章
Jelena Vukojevi and Milica Ljaljevi Grbi*
Abstract: The main reasons of fungal expansion in museums are inadequate relative humidity and temperature and the spore’s germination can be controlled by regulation of these two factors. Numerous paintings, originated from 11 Serbian museums, were analyzed for presence of moulds. Samples from canvas, dyes and wooden frames with visual changes were subjected to the analysis. Species of genera Alternaria, Aspergillus, Aureobasidium, Cladosporium, Drechslera, Epicoccum, Penicillium, Rhizopus, Trichoderma, Ulocladium and Wardomyces were isolated and identified. Some of the found species are known as potential producers of lignocellulolytic enzymes and other destructive metabolites, as well as causative agents of human diseases.[...] Read More.
Keywords:  icromycetes, paintings, dyes, fungal deterioration.
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文章
S.C. Sati and Savita Joshi*
Abstract: The sensitivity of five pathogenic multi drug resistant bacteria (Bacillus subtilis, Erwinia chrysanthemi, Escherichia coli, Agrobacterium tumefaciens and Xanthomonas phaseoli) was tested against the crude leaf organic extracts (methanol, ethanol, chloroform and hexane) and aqueous extracts of a Kumaun Himalayan gymnospermous plant Juniperus communis (Cupressaceae), employing disc diffusion method. All the extracts of Juniperus communis were found effective by showing a mark zone of inhibition except aqueous extract. The hexane extract showed maximum inhibition against the test microorganisms (ZOI, 16 – 21 mm) followed by ethanol, methanol and chloroform extract (ZOI, 6 – 17 mm). The inhibitory activity of these extracts was found very effective as compared to Ampicillin (10 mcg) and Erythromycin (15 mcg) standard antibiotics which were used as positive control against these tested microorganisms.[...] Read More.
Keywords: Kumaun Himalaya, antibacterial activity, Juniperus communis, gymnosperm, crude extract, ampicillin, erythromycin.
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文章
Rosa E. Reyes,*, Hugo Ramírez Saad, Julia Pérez, Enrique Meléndez, Armando Navarro Chiharu Murata and Alejandro Cravioto
Abstract: The genus Citrobacter is closely related to Salmonella and Escherichia coli, and there are some serological cross-reactions existing among these species. These cross-reactivities are caused by O-specific polysaccharide antigens in the LPS, which contain similar epitopes. In some cross-reactive strains, O-specific polysaccharides exhibit structural homology. In order to determinate the frequency of intra-strain variation of lipopolysaccharides (LPS) from Citrobacter freundii E9750 by in vitro passages at two different growth temperatures, isolates obtained from Citrobacter freundii E9750 in vitro passages at 37 and 42°C were analyzed for carbohydrate concentration, reactions to serological tests, and heterogeneity of lipopolysaccharides using SDS-PAGE. The genetic relatedness of the isolates was investigated using the PCR-RFLP profile of rfb and Pulsed Field Gel Electrophoresis (PFGE) profiles. Variation in expression of LPS was observed as a change in the concentration of carbohydrates. In addition, low reactivity with C. freundii E9750 O-antiserum, serological cross reactivity with S. senftenberg O-antiserum, and heterogeneity in electrophoretic mobility, were found. The PFGE and RFLP patterns of all isolates were indistinguishable from each other, including those that presented a serological reaction with the O -antigen sera from S. senftenberg. C. freundii E9750 NCTC isolated strains showed a high frequency in LPS variability. Analysis of the results suggested that heterogeneity was due to changes in the structure of the LPS carbohydrates. Since lipopolysaccharides are important factors in virulence and determine the basis for serotyping, the high frequency of intra-strain O-antigen heterogeneity in C. freundii E9750 is important.[...] Read More.
Keywords: Lipopolysaccharide, Citrobacter freundii, intra-strain variation, serological cross-reaction, O-antigen, SDS-PAGE, RFLP.
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