Search for Articles:
Journal:
Subject:

Journal Menu

Home

Journal Browser

Vol.24 (2025) Iss. 1
Vol.23 (2024) Iss. 1
Vol.22 (2023) Iss. 1
Vol.21 (2022) Iss. 1
Vol.20 (2021) Iss. 1
Vol.19 (2020) Iss. 1
Vol.18 (2019) Iss. 1
Vol.17 (2018) Iss. 1
Vol.16 (2017) Iss. 1
Vol.15 (2016) Iss. 1
Vol.14 (2015) Iss. 1
Vol.13 (2014) Iss. 1
Vol.12 (2013) Iss. 1
Vol.11 (2012) Iss. 1
Vol.10 (2011) Iss. 1
Vol.9 (2010) Iss. 1
Vol.8 (2009) Iss. 1
Vol.7 (2008) Iss. 1
Vol.6 (2007) Iss. 1
Vol.5 (2006) Iss. 1
Vol.4 (2005) Iss. 1
Vol.3 (2004) Iss. 1
Vol.2 (2003) Iss. 1
Vol.1 (2002) Iss. 1

Advanced Journal of Microbiology Research

93 Articles | Volume 19 (2020)
Research Article
Karim Solaimani* and Fatemeh Shokrian
Abstract: Environmental change and socio-economic pressure are expected to have significant impacts on Northern Alborz vegetation, particularly along ecotone such as the treeline. Remote sensing may be well suited to monitoring recent changes across the treeline because it captures integrated changes of all vegetation life forms over large spatial extents. This research examines treeline vegetation composition and change along the Nojmeh treeline using a high resolution, ETM+ 2000. In this paper we investigate the use of satellite data to produce a classification of a treeline ecotone in Northern Alborz Mountains which has supported the field investigation as ground truth data collected in the summers from 2008 to 2010. The maximum correlation is related to the Bands 3 and 4 of Landsat ETM+ with shrubs canopy cover that indicated in r of 0.34 and 0.37 respectively. The maximum rate of correlation in respect to the indices were recognized for the vegetation cover of moisture stress index (MSI) for forbs cover (r= 0.62). The ratio vegetation index (RVI) for grasses cover was indicated (r= 0.53). In conclusion, the results are specified that the ETM+ sensor is the significant data with the elevated competence to discrimination of ecotone using vegetation indices.[...] Read More.
Keywords: ETM+, classification, ecotone, treeline, Alborz, Iran.
  2020, 19(1), 1-6; 
Full text
Views:1181
Download:1357
Research Article
Ifeanyi, V. O.*, B. N. Anyanwu, J. N.Ogbulie, R. N. Nwabueze, W. Ekezie and O. S. Lawal
Abstract: The research was on the determination of the effect of light and salt concentrations on Aphanocapsa algal population. Microbiological standards were observed in the isolation of Aphanocapsa sp from water sample collected from Shell Petroleum flow station. The effect of 5,000, 3500 and 2,000 lux light intensities and 10 g/L through 50 g/L salt concentrations on the growth and proliferation of Aphanocapsa sp was determined by a spectrophotometer at 340 nm. At Day 9, the algal species gave the highest optical density of 0.495 nm at 5000 lux. The optimum salinity on the algal growth was 10 g/L and this gave 1.23 nm optical density at Day 9. The control gave 0.45 nm on Day 9. This research monitored the effect various light and salt concentrations had on Aphanocapsa sp growth and the optimum light intensity and salt concentration were identified.[...] Read More.
Keywords: Algae, environmental parameters, light intensity, salt concentration, growth, population.
  2020, 19(1), 1-6; 
Full text
Views:1227
Download:1365
Research Article
Onyenwe, N. E., Mbata T. I.* and Adeleke, O. E.
Abstract: The effect of the mutagen (acridine orange) on the multi-resistant antibiotics beta lactamase producing Staphylococcus aureus strain of bovine and human origin was investigated and tested individually using iodiometric (cell supervision) method for the level of beta-lactamase produced by each strain and antibiotic – sensitivity screening using single disc agar diffusion method. Analyses revealed that 80% of the isolates from bovine origin produced beta-lactamase while only 20% showed absence of the enzyme, while 68% of the human isolates produced beta-lactamase while only 32% showed absence of the enzyme sensitivity to cefotaxime, cefuroxime and ceftriaxine were observed in both strains of bovine and human origin. At high concentrations of the mutagen (250 µg/ml), zones of inhibitions were low for penicillin, amoxicillin and augmentine at reference MIC’s of 0.25 µg/ml, while the cephalosporins recorded high zones of inhibition at 0.5 and 1.0 µg/ml reference MIC’s in all the strains at 250 and 200 µg/ml of the concentration of the mutagen (acridine orange). The resistance bovine strains producing beta-lactamase resisted curing with acridine orange than the human strains of S. aureus.[...] Read More.
Keywords: Acridine orange, Staphylococcus aureus, beta-lactamase, iodometric.
  2020, 19(1), 1-6; 
Full text
Views:1132
Download:1454
Research Article
Taha Nazir*, Abdul Hameed, Javed Anver Qureshik and Bashir Ahmad
Abstract: Isoniazid resistant Mycobacterium tuberculosis strains are a serious threat for successful tuberculosis control programs. Therefore, present study was aimed to figure out the pattern and level of resistance of M. tuberculosis against isoniazid. A total of 172 specimens of sputum, pus and bronchial washings; 70.9% males and 29.1% females with 84.30% pulmonary and 15.69% extrapulmonary tuberculosis were collected from six different sources. The inoculums were prepared using 0.5 Mac Farland turbidity standards. Five concentrations of isoniazid were used in Lowenstein Jensen (LJ) medium that is 3, 6, 9, 12 and + 12 µg/ml for sensitivity testing. Data showed 25 (14.5%) resistant and 147 (85.5%) sensitive M. tuberculosis strains. The growth was not inhibited at first (3 µg/ml) and second (6 µg/ml) drug levels, while 36% isolates inhibited at third level (9 µg/ml), 28% at forth level (12 µg/ml) and 24% at fifth level (10 µg/ml) and 12% at higher than fifth Level (> 12 ug/ml). These incorporated drug concentrations are higher than therapeutic index and not recommended in actual clinical practice. It is thus obvious to explore some other effective chemotherapeutic agents, modify combinations or figure out more effective procedures to stop morbidity and mortality due to isoniazide resistance of M. tuberculosis.[...] Read More.
Keywords: Isoniazid, mycobacterium tuberculosis, resistance, Lowenstein Jensen medium.
  2020, 19(1), 1-6; 
Full text
Views:1131
Download:1375
Research Article
Minghua Xiong, Chunyan Li*, Junbo Pan, Xiaosong Cheng, and Chuanwu Xi
Abstract: Bensulfuron-methyl (BSM) is a widely applicable sulfonylurea herbicides. However, BSM remains in environment for extended period of time (over 100 days) and causes a series of environmental problems. In this study, BX2, a strain presents high BSM degradation abilities, was isolated from an activated sludge sample using a continuous enrichment method and determined to be a member of the genus Rhodococcus based on its physiobiochemical characteristics and 16S rRNA gene sequence. Strain BX2 degradated 92% BSM from an initial concentration of 20 mg/L within a 7- day incubation at 35℃. The specific degradation rate increased with an increase in the initial BSM concentration and the maximum specific degradation rate obtained was 0.146 mg/(mg•d) at 140 mg/L. BSM degradation by strain BX2 can be presented by Haldane’s inhibition equation and the kinetic parameters were:  vm ax  = 16.75 mg/(mg•d), ks = 7809.36 mg/L and ki = 2.41 mg/L, respectively. These results indicated that the strain BX2 could be an excellent candidate for bioremediation of BSM-contaminated environments due to its high BSM-degradative ability.[...] Read More.
Keywords: Bensulfuron-methyl (BMS); Rhodococcus sp.BX2; Isolation; Biodegradation.
  2020, 19(1), 1-6; 
Full text
Views:1299
Download:1459
Research Article
Neelawan Pongsilp* and Nantakorn Boonkerd
Abstract: Rhizobial strains that nodulate Vigna radiata (mungbean) were examined for their resistance to several stress conditions. One strain of mungbean rhizobia was selected to construct a collection of transposon mutants based on resistance to high temperature (40°C), alkalinity (pH 8.0) and several heavy metals. One mutant that is deficient in resistance to high temperature, alkalinity and zinc was selected to estimate the relation between resistance to stress conditions and symbiotic performance. Southern hybridization analysis showed a single transposon insertion in the mutant strain. The impaired symbiotic performance was observed in the host plants inoculated with the mutant strain as compared with the wild-type strain. This result suggested that genes involved in stress resistance affected the symbiotic ability. The 16S rDNA sequence analysis revealed that the strain is a member of Bradyrhizobium with 98% identity.[...] Read More.
Keywords: Bradyrhizobium, mutant, transposon, stress tolerance, symbiosis.
  2020, 19(1), 1-6; 
Full text
Views:1205
Download:1399
Research Article
Hossein Hassanpour Darvishi and Hossein Aliabadi Farahani
Abstract: In order to study domestic wastewater influence on secondary metabolite in thyme (Thymus vulgaris L.) under field condition, this experiment was carried out in Iran. In the field, 15 lysimeters having thyme (T. vulgaris L.) were used, where 1 to 5 lysimeters were irrigated by domestic wastewater and primary drainage water was accumulated. 6 to 9 lysimeters were irrigated by primary drainage water and then, were accumulated by secondary drainage water and we have irrigation 10, 11 and 12 lysimeters by secondary drainage water. In order to compare plants characteristics, in 13, 14 and 15 lysimeters were irrigated by agronomical water. The secondary metabolite in thyme 3.4% increased under irrigation by secondary drainage water into irrigation by agronomical water. The findings may give applicable advice to medicinal and aromatic plants researchers for management and concern on water strategy and estimate of irrigation carefully for increase of quantity and quality yields in medicinal and aromatic plants farming.[...] Read More.
Keywords:
  2020, 19(1), 1-6; 
Full text
Views:1161
Download:1341
Research Article
Yoichiro Sogame, Akemi Kida and Tatsuomi Matsuoka*
Abstract: Tolerance of the resting cysts of protozoa against gastric acid and proteases is a strategy for surviving in the digestive tract of animals. The present study aimed to examine the protection mechanism against HCl in resting cysts of Colpoda cucullus, which were surrounded by a cyst wall, which is composed of an outermost layer (ectocyst) and several inner layers (endocyst). In addition to water, paraformaldehyde, hydrogen peroxide (H2O2) and ethanol may diffuse across the cyst wall, because the cysts hardly showed tolerance against these molecules. However, the cysts showed tolerance against HCl (0.01 to 1 M) and pepsin. The tolerance against HCl disappeared soon after the onset of excystment induction. Electron micrographs of the excysting cells showed that digestion of the endocyst began within 30 min after the onset of excystment induction. The encysting cells surrounded by the ectocyst (3 h after encystment induction) did not show tolerance against HCl, but acquired it just after a first layer of the endocyst was formed beneath the ectocyst (6 h after encystment induction). These results suggest that the tolerance of the resting cyst of C. cucullus against HCl may be acquired by preventing its diffusion across the endocyst, although the possibility that cytoplasmic molecules and the plasma membrane may acquire tolerance has not been ruled out.[...] Read More.
Keywords: Colpoda cucullus, resting cysts, tolerance, HCl, excystment.
  2020, 19(1), 1-6; 
Full text
Views:1184
Download:1398
Research Article
Qing-Ping Hu and Jian-Guo Xu*
Abstract: Siderophores, a high-affinity chelating agents for ferric iron, is one of the mechanisms by which biocontrol agents’ act in inhibiting the growth of phytopathogens. Bacillus subtilis QM3, a siderophore producer, is a potential biocontrol agent. In this study, a simple double-layered chrome azurol S agar (SD-CASA) plate assay was developed. We further studied optimal conditions for detection siderophore production by B. subtilis QM3 using various history cultures, pH value, amino acid, and different carbon-nitrogen ratio as four variables. After incubating different history cultures we found out that the LB medium presented strong significant CAS reaction even for 12 h, and with the help of changing variables on SD-CASA plate assisting paper-disc diffusion, strain QM3 from LB medium with Fe3+ (10 μmol/L) showed difference interestingly. In addition, CAS reaction and growth reaction also increased with pH 7.0, tryptophan 10 μmol/L and carbon-nitrogen ratio 5:1. The findings on solid medium were similar as that in liquid medium. The SD-CASA assay should be a useful tool for screening potential biocontrol microorganisms by siderophore production.[...] Read More.
Keywords: A simple double-layered CAS agar assay, paper-disc diffusion, siderophores, Bacillus subtilis QM3.
  2020, 19(1), 1-6; 
Full text
Views:1149
Download:1375
Research Article
Abdul Rehman, Kishwar Sultana, Nisar Minhas, Muhammad Gulfraz, Ghazala Kaukab Raja* and Zahid Anwar
Abstract: To study most prevalent wheat seed-borne mycoflora and its effect on the nutritional value, freshly harvested three and six months old stored wheat grains were collected from various parts of Pakistan. For isolation of seed-borne fungi, agar plate method was found more effective as compared to standard blotter method. Alternaria alternata was found to be the most prevalent fungus. Chemical analysis of seeds clearly showed a decrease in the carbohydrate, fats and ash contents of stored wheat grains as compared to the freshly harvested seeds with no effect on total proteins. The growth of A. alternata on seeds during storage might have resulted in low nutritional contents.[...] Read More.
Keywords: Mycoflora, Alternaria alternata, seed-borne fungi, post-harvest storage, pathogens.
  2020, 19(1), 1-6; 
Full text
Views:1175
Download:1434
Research Article
Moussa I. M.*, Kh. F. Mohamed, Marwah Mohamed, Nasr E. A., Atef M. Shibl, Mounir M. Salem-Bekhit and Hatem M. E.
Abstract: Polymerase chain reaction (PCR) are rapid and simple means for the differentiation of members of Mycobacterium tuberculosis complex, especially Mycobacterium bovis and M. tuberculosis, where it is important to distinguish between zoonotic sources (cattle and unpasteurized dairy products) and human sources of tubercle disease. This study is aimed to evaluate the recent technique such as PCR and (BACTEC MGIT 960 TM system) for diagnosis of M. tuberculosis complex among cattle in Egypt. 1180 cattle were examined during the period of 2008 to 2010 by single intradermal tuberculin test. 29 animals (2.46%) were positive reactors, the results of isolation and identification using conventional culture method Lowenstein-Jensen medium were 22 mycobacterial isolates (75.9%), 20 (68.97%) M. bovis and 2 (6.9%) unidentified slow grower}. The recovery rate of BACTEC MGIT 960TM system was 82.8%, while in case of Lowenstein-Jensen medium was 75.9%. The mean time for detection of Mycobacterium was 17.8 ± 0.9 days and 46.5 ± 0.4 days for BACTEC MGIT 960TM system and Lowenstein-Jensen medium, respectively. While the contamination rate with BACTEC MGIT 960TM system was 6.9 and 10.3% in Lowenstein-Jensen medium. PCR technique in the present study could differentiates between M. bovis and M. tuberculosis within few h rather than the long period required for the biochemical identification tests. Therefore, the use of PCR in the diagnosis of Mycobacterium in clinical samples is as rapid, more reliable, sensitive and specific techniques and can be used for large scale screening of Mycobacterium in areas where the disease is still a public health hazard as in Egypt.[...] Read More.
Keywords: Bovine tuberculosis, tuberculin test, Lowenstein-Jensen medium, BACTEC system, PCR.
  2020, 19(1), 1-6; 
Full text
Views:1306
Download:1440
Research Article
M. Monajjemi*, R. Hasani, R. Rasoolzadeh and F. Mollaamin
Abstract: 14-O-demethyledelboxine is one of the most important alkaloids in Consolida species. It is toxic and has many effects in body. In this article, we used dipole moment and nuclear magnetic resonance (NMR) to describe this molecule properties. Nanoparameters and chemical shift calculations, geometry optimization and energies have been performed with ab initio method at HF/Sto-3G, B3Lyp/6-31G and B3Lyp/6-31G* levels with magnetic properties of the gauge-including atomic orbital method. According to this study this molecule has polarity, therefore it can highly react with microtubules. So it is recommended that more study in this molecule and the groups can be bound to evaluate these characters so it could be useful. Dipole moment calculations approve ab initio methods according to these results.[...] Read More.
Keywords: 14-o-demethyldelboxine, nuclear magnetic resonance (NMR), B3lyp, isotropy, anisotropy.
  2020, 19(1), 1-6; 
Full text
Views:1203
Download:1398
Research Article
Myriam BEN SAID*, Sana KHEFACHA, Lobna MAALEJ, Imen DALY and Abdennaceur HASSEN
Abstract: Pseudomonas aeruginosa is a commonly found nosocomial opportunistic pathogen that is characterized by its ability to form biofilm to protect itself from various external pressures. Biofilms are problematic in particular food industry sectors and in water distribution systems. In this study, we propose to explore the impact of UVC dose on biofilm production by P. aeruginosa strains. The biofilms densities were assessed by crystal violet assay. A relationship between UVC exposed dose and biofilm density was examined by establishment of new model linking between UVC dose and physiology bacteria response concerning biofilm production (UVC dose/ biofilm production).[...] Read More.
Keywords: UVC dose, biofilm, P. aeruginosa, quorum sensing, RecA, model.
  2020, 19(1), 1-6; 
Full text
Views:1455
Download:1646
Research Article
Hami Kaboosi
Abstract: According to the definition of probiotics by the Food and Agriculture Organization of the United Nations/World Health Organization, “probiotics are live microorganisms, which when administered in adequate amounts confer a health benefit on the host”. Microorganisms that are probiotics in humans include Enterococci, Bifidobacteria and lactic acid bacteria, such as Lactobacilli, Lactococci and Streptococci. This research was conducted to determine the presence of antibacterial effects among the probiotics isolated from different bioyoghurts against some common bacterial pathogens. Lactobacillus sp., Streptococcus sp. and Bifidobacterium sp. from yoghurts containing probiotics were isolated and examined for their antibacterial effects against Staphylococcus aureus, Escherichia coli, Salmonella typhi, and Pseudomonas aeruginosa. The modified agar overlay method was used for determination of the presence of antibacterial effects among the isolated probiotics. Results showed the presence of antibacterial effects among the probiotics that were isolated from bioyoghurts. The spectrum of their antibacterial effects varied against the selected pathogen. Antibacterial effects are one of the most important selection criteria for probiotics, and the verified antibacterial activity of the probiotics supports the development of these functional foods as a key to the improvement of health in the consuming public.[...] Read More.
Keywords: Probiotics, bioyoghurts, Lactobacillus spp., Bifidobacterium spp., antibacterial effects.
  2020, 19(1), 1-6; 
Full text
Views:1316
Download:1478
Research Article
Aphidech Sangdee*, Sarawut Sachan and Surasak Khankhum
Abstract: Anthracnose disease is one of the major economic constraints to chilli production in tropical and subtropical regions. Ten isolates of Colletotrichum capsici causing chilli anthracnose were collected from 10 provinces in the northeast of Thailand. The isolates were evaluated for their morphological and cultural characteristics, pathogenic variability on chilli fruits and genetic characterization using random amplified polymorphic DNA (RAPD-PCR). Based on the morphological traits and cultural characteristics of the C. capsici populations, 10 isolates were categorized into six groups. These were designated, respectively, as CC-I, CC-II, CC-III, CC-IV, CC-V and CC-VI. In Potato Dextrose Agar culture, most of the isolates produced cottony colonies. However, differences were obtained in colony color, shape and size of conidia. Based on the effect of carbendazim, 10 isolates were classified into two groups designated as highly resistant group (90% inhibition). Three virulence degrees of 10 isolates on chilli fruits were evaluated. Molecular polymorphism generated by RAPD confirmed the variation of the different isolates and they were grouped into two clusters. However, morphological, pathological and RAPD grouping of isolates suggested no correlation among the test isolates.[...] Read More.
Keywords: Colletotrichum capsici, morphological and cultural characteristics, pathogenic variability, random amplified polymorphic DNA (RAPD).
  2020, 19(1), 1-6; 
Full text
Views:1448
Download:1521
Research Article
Atanda S. A*, Pessu P. O., Agoda S., Isong I. U., Adekalu O. A., Echendu M. A. and Falade T. C.
Abstract: This review focused on the worldwide contamination of foods and feeds with mycotoxins as a significant problem. Mycotoxins are secondary metabolites of molds that have adverse effects on humans, animals, and crops that result in illnesses and economic losses. Aflatoxins, ochratoxins, trichothecenes, zearelenone, fumonisins, tremorgenic toxins, and ergot alkaloids are the mycotoxins of greatest agro-economic importance. Factors influencing the presence of mycotoxins in foods or feeds include environmental conditions related to storage that can be controlled. Other extrinsic factors such as climate or intrinsic factors such as fungal strain specificity, strain variation, and instability of toxigenic properties are more difficult to control. The economic impact of mycotoxins include loss of human and animal life, increased health care and veterinary care costs, reduced livestock production, disposal of contaminated foods and feeds, and investment in research and applications to reduce severity of the mycotoxin problem. Although efforts have continued internationally to set guidelines to control mycotoxins, practical measures have not been adequately implemented.[...] Read More.
Keywords: Fungi, mycotoxins, aflatoxins, contamination, relative humidity, safe moisture content.
  2020, 19(1), 1-6; 
Full text
Views:1525
Download:1636
Research Article
M. A. Latif,*, M. M. Rahman, M. S. Kabir, M. A. Ali, M. T. Islam and M. Y. Rafii
Abstract: Genetic diversity was studied for blast resistant and susceptible genotypes using 13 morphological characters. Plant height, days to flowering and maturity, panicle length, number of spikelet per panicle, number of filled grain per panicle, number of unfilled grain per panicle, 1000-grain weight and yield per hill were indicated as important contributors to genetic divergence in 14 rice genotypes. The first 3 principal components accounted for 78.72% of the total variation among resistant and susceptible rice genotypes. The genotypes were grouped into 7 clusters according to Mohalanobis’s D2 statistics and canonical vector analysis. On the basis of cluster distances, high yielding along with highly susceptible genotype, Bangladesh Rice Research Institute (BRRI) dhan29 could be crossed with resistant genotypes, BR 6017-3-3-4-1 and Zong-yu 7. Similarly, BRRI dhan28 could be crossed with Qing Liali No.1 for the development of blast resistant rice varieties with higher yield.[...] Read More.
Keywords: Blast disease, genetic diversity, quantitative traits, rice, resistant genotypes.
  2020, 19(1), 1-6; 
Full text
Views:1390
Download:1501
Research Article
Izham N. S. A. S., H. Zuridah, *, S. Rashidah, O. Azizon and N. A. Zeenathul
Abstract: The role of Epstein-Barr virus (EBV) as a cofactor in breast cancer is controversial and its association with breast cancer varies. In this study, EBV was detected by using in situ hybridization technique (ISH) to detect Epstein-barr virus encoded RNA1 (EBER1) transcripts. Archival formalin-fixed paraffin embedded breast cancer tissue samples (n = 139) and normal breast tissue (n = 20) obtained from Hospital Tuanku Ja’afar were sectioned, stained and examined microscopically for nuclear staining and by DNA amplification of the same gene. By ISH, 83/139 (59.7%) and 12/20 (60%) were EBV positives in the breast cancer tissues and normal tissues, respectively. On the other hand, confirmation by polymerase chain reaction (PCR) found that additional six samples (89/139 or 64%) breast cancer tissues were positive for EBER1 gene. To further confirm the identity of these amplified products, two samples (UiTM-53 and UiTM-73) were sequenced, BLAST, analyzed phylogenetically and was found to be 100% similar to the EBV EBER1 gene sequences already deposited in the GenBank (accession numbers AB065135, FN545286, EF187853 and DQ883818). These preliminary findings suggest that there is a correlation between EBV and breast cancer but need further testing with more samples to confirm the role of EBV.[...] Read More.
Keywords:
  2020, 19(1), 1-6; 
Full text
Views:1486
Download:1559
Research Article
Full Length Research Paper
Abstract: Isolation and characterization of new LACTOBACILLI strains with high level acetaldehyde production, from traditional fermented milk, in different provinces of Iran, are reported. In this study, a total of 112 local dairy products such as yoghurt and doogh were collected from four provinces in the west of Iran, namely Kordestan, Kermanshah, Ilam and Lorestan. Ninety three isolates with extensive diverse phenotypic and biochemical characteristics were identified. These isolates were screened for productions of acetaldehyde during fermentation of skim milk. 67 isolate were positive for acetaldehyde production. Two strains (KR43 and IL121) with the highest acetaldehyde production were further characterized by amplification and sequencing of 16S rRNA genes and their phylogenetic trees were constructed. The results showed that the two strains were similar to LACTOBACILLUS FERMENTUM. 2-dimensional electrophoresis analysis was used to investigate the proteome of the cytosolic fraction extracted from stationary phase cells of the KR43 strain. Also some spots of KR43 strain were analyzed by MS/MS subunits of acetoin dehydrogenase involved in the production of acetaldehyde from acetoin, which has not been reported in LACTOBACILLI yet. To our knowledge, this is the first report in LACTOBACILLI.[...] Read More.
Keywords: Acetaldehyde production, acetoin dehydrogenase, Lactobacillus, Iran, proteomics, fermented foods, dairy products.
  2020, 19(1), 1-6; 
Full text
Views:1453
Download:1599
Research Article
Noor-Zarina Abdul-Wahab, Saleha Shahar, Halimah Abdullah-Sani, Azimahtol Hawariah Lope Pihie and Nazlina Ibrahim*
Abstract: The antioxidant, antibacterial, and antiviral effects of crude methanol extract from the leaves of Goniothalamus umbrosus were studied. Good free radical scavenging activity using 1,1- diphenyl-2-picrylhydrazyl (DPPH) assay was shown by the extract at EC50 of 0.263 mg/ml compared to 0.01 mg/ml for trolox as the positive control. The extract showed greater antibacterial activity against Gram-positive bacteria than Gram-negative with methicillin resistant Staphylococcus aureus (MRSA) isolates were more sensitive than methicillin sensitive S. aureus. Cytotoxicity testing of the leaf extract and goniothalamin a styrylpyrone derivative (SPD) as a lead compound found mostly in the genus Goniothalamus was performed on Vero cells. From the test, the CC50 value for the extract was 125 µg/ml and for SPD 31.25 µg/mL (1.563x10-7 µM). Antiviral test was carried out against Herpes Simplex virus type 1 infected to Vero cells. The results showed that G. umbrosus leaf methanol extract was effective in showing the antiviral activity in all three treatments but SPD is effective only in the first treatment; 1) (C+V)+E, extract and SPD were able to control virus post-infection 2) (C+E)+V: the extract has prophylactic activity implied by treatment of cells with the extract for one day before viral infection and C+(V+E) refers to the ability of extract to control viral infectivity when extract and virus was added simultaneously to cell. This study showed the potential of non-cytotoxic G. umbrosus leaf methanol extract as herbal alternative against MRSA and herpes simplex viruse (HSV) -1.[...] Read More.
Keywords: Goniothalamus umbrosus, leaf, methanol extract, styrylpyrone derivative, antioxidant, antibacterial, cytotoxicity, antivirus.
  2020, 19(1), 1-6; 
Full text
Views:1328
Download:1408
Research Article
Full Length Research Paper
Abstract: The effect of soyabeans fortification on acceptability and shelf life of ogi was investigated. The pH of the fermenting ogi decreased steadily with a corresponding increase in titratable acidity (TA). The pH and TA ranged between 3.03 and 4.30; and 1.07 and 1.54 (mg/100 g) respectively. During fermentation, a significant increase in yeast and lactic acid bacteria (LAB) counts was observed. The aerobic plate count (log cfu/ml) of fermenting ogi samples ranged between 5.96 and 5.99. Sample A containing sorghum, millet and soybeans had the highest protein content (9.2%) while sample D containing sorghum only had the lowest (8.16%). Sample D was rated best in all the parameters tested. This study revealed that fortification with soybean at 10% level and a combination of sorghum and millet improved the nutrition quality of ogi without adverse effect on acceptability.[...] Read More.
Keywords: Nutritional quality, soybean, fortification, composite ogi, acceptability.
  2020, 19(1), 1-6; 
Full text
Views:1175
Download:2002
Research Article
Huey-Chun Huang, Shao-Hua Chiu, Hui-Ju Ke, Shu-wen Chiu, Sze-Yun Wu and Tsong-Min Chang*
Abstract: The study was aimed at investigating the antimelanogenic and antioxidative effects of Bifidobacterium infantis culture filtrate. The efficacy of the bacterial culture filtrate was evaluated spectrophotometrically. The results revealed that B. infantis culture filtrate effectively scavenge 2,2-diphenyl-1-picryl-hydrazyl (DPPH) and 2,2’-azino-bis(3-ethylbenzthiazoline-6-sulphonic acid) ABTS radicals, and show potent reducing power in a dose-dependent pattern. Additionally, the bacterial culture filtrate suppresses murine B16F10 tyrosinase activity and the amount of melanin in a dose-dependent manner. We conclude that the B. infantis culture filtrate may be applied in the formulations of skin care cosmetics.[...] Read More.
Keywords: Bifidobacterium infantis, tyrosinase, melanin, antioxidant.
  2020, 19(1), 1-6; 
Full text
Views:1312
Download:1495
Research Article
Ahsan B., Beiranvand S., Abdulmaleki N., Mohamadi H. and Kalantar E.*
Abstract: Antimicrobial resistance has become a serious public health concern all over the world. The objective of this study was to determine susceptibility patterns of microorganisms to antibiotics in 11 hospital laboratories in Kurdistan province. During one month period (February, 2010), all the clinical specimens which were received from the laboratories were processed for isolation and identification of bacteria to the species level by standard methods. Testing procedures were validated following the Kirby-Bauer disc diffusion technique using Muller Hinton agar. Susceptibility testing was performed on Mueller– Hinton agar. A total of 4395 clinical specimens were obtained from 4301 patients among them, 1062 (24.7%) were male and 3239 (75.3%) were female, giving on overall male to female ratio of 0.32. Their mean age was 31.3 years (range: 4 to 74 years). Based on data 310 pathogens were isolated and Escherichia coli 183 (59.3%), followed Klebsiella pneumoniae 40 (01.29%) and Staphylococcus aureus 39 (1.25%) were the predominant isolated bacteria. The most resistant antibiotics tested against isolated bacteria were penicillin, ampicillin, and amoxicillin. Lastly, these resistance rates leave imipenem and ciprofoxcacin as the reliable agent for the empirical treatment in this province. The present study has shown that the urinary tract infection (UTI) patients have a higher rate of infection. The risk of antibiotic resistance in isolated bacteria, particularly E. coli, emphasizes the importance of hospital control measures and rational prescribing policies. Lastly, these resistance rates leave ciprofloxcacin and imipenem as the reliable agent for the empirical treatment in this province.[...] Read More.
Keywords: Antimicrobial resistance, Escherichia coli, ciprofloxacin and imipenem.
  2020, 19(1), 1-6; 
Full text
Views:1293
Download:1403
Research Article
Payam Haghighi Khoshkhoo*, Gita Akbariazad and Mehrdad Tashakori
Abstract: The objective of the present work was to perform the efficacy of one attenuated live vaccine Nobilis CAV P4 (Intervet Co., Netherland) in broiler breeder and their progenies compared to naturally infected flock. The vaccine was administrated to Ross 308 broiler breeder at 6 week old through S.C. rout. A total of 352 serum samples were collected from vaccinated and unvaccinated breeder flocks (that infected naturally) from 6 to 33 weeks old and 2 times in their progenies at one-day old. Sera were analyzed using indirect Elisa kit (Synbiotic Corporation, USA) and data obtained were compared between 2 groups statistically. Due to natural infection of chicken infectious anemia (CIA) in unvaccinated breeder, mean titer in breeder and their progenies was significantly higher than vaccinated breeder and their progenies (P0.05) but CV% in progeny of unvaccinated breeder flock was twice more than progeny of vaccinated flock. There were 5 and 12% of zero titers of antibody in hens and progenies in unvaccinated breeder flock respectively. All breeders from vaccinated flock were positive serologically. It seems that vaccination could be an efficient rout for eliminating susceptible birds, decreasing variation in antibody titers and induction persistent and homogenous antibody titer in progeny.[...] Read More.
Keywords: Chicken infectious anemia (CIA), live vaccine, broiler breeder, efficacy.
  2020, 19(1), 1-6; 
Full text
Views:1169
Download:1482
Research Article
Maryam Adabi, Mosadegh Jabbari and Abdolaziz Rastegar Lari*
Abstract: The occurrence of drug-resistant Vibrio cholerae is being reported with increasing frequency worldwide. Spread of resistant strains has been attributed, in part, sulfamethoxazole trimethoprim-constin (SXT-C). Sixty V. cholerae isolates obtained from cholera patients from different provinces in Iran during 2004 to 2006 and thirty-seven V. cholerae strains from surface water sources at 5 different locations in Tehran, Iran during 2006 were subjected to antibiotic susceptibility testing and polymerase chain reaction amplification of SXT-C. In clinical isolates the highest and the least levels of antibiotic resistance were seen to SXT, streptomycin and chloramphenicol (95, 95 and 92%, respectively) and doxycycline, gentamicin and oxytetracycline (0, 3 and 3%, respectively). PCR for SXT element of clinical and environmental isolates was positive for 95 and 19% of isolates, respectively. The results of this study showed that among the clinical and environmental V. cholerae resistance to SXT, streptomycin and chloramphenicol could be, in part, due to wide distribution of SXT-C isolates.[...] Read More.
Keywords: Anti-microbial resistant, Vibrio cholerae, sulfamethoxazole trimethoprim-constin (SXT-C).
  2020, 19(1), 1-6; 
Full text
Views:1213
Download:1407
Research Article
Chantel W. Swart, Pieter W. J. van Wyk , Carolina H. Pohl, Wilma M. Kriel and Johan L. F. Kock*
Abstract: The anti-mitochondrial antifungal hypothesis implies a link between mitochondrial activity, fungal fruiting structures and susceptibility towards mitochondrial inhibitors. Here it is shown that the oomycete, Phytophthora nicotianae fits the hypothesis. Fruiting structures (zoosporangia) of this oomycete showed increased beta ( )-oxidation when probing levels of 3-hydroxy fatty acids (3-OH oxylipins) with specific polyclonal antibodies. In addition, increased mitochondrial activity was also observed in the zoosporangia when the mitochondrial transmembrane potential ( m) probe, Rhodamine 123 was added to the culture. This indicates increased mitochondrial activity in the zoosporangia when compared to the hyphae. When the anti-mitochondrial drug acetylsalicylic acid (ASA) was added to cultures of this oomycete, the zoosporangia were, as expected, most susceptible and were drastically inhibited in the presence of 1 mM of this compound. Similar ASA inhibition results were recorded for P. citrophthora. It is concluded that anti-mitochondrial compounds may find application in combating these devastating plant pathogens and that urgent further research is needed in this direction.[...] Read More.
Keywords: Acetylsalicylic acid, antifungal, anti-mitochondrial, asci, Phytophthora, plant pathogen.
  2020, 19(1), 1-6; 
Full text
Views:1122
Download:1378
Research Article
Ali Aberoumand*and S. S. Deokule
Abstract: Carbohydrates are the major nutrients of fruits and vegetables in human nutrition. Sucrose is one of the important parameters for the assessment of the commercial quality of the fruit, since consumers prefer the sweetest fruits. Results showed that fructose, glucose, sucrose contents were high in Cordia myxa (9.38, 12.75 and 29.09%) respectively and the starch content was high in Alocacia indica (60.41%). Alocacia has high calorie and nutritional value because it contains high carbohydrates contents (72.66%) and Cordia was the sweetest fruits because it contains the maximum amounts of sucrose, glucose and fructose. The TDF content was low in Portulaca oleracia (dried) (8 g %) and was high in Cordia myxa (27.7 g %). It is observed that vegetables of Portulaca, Asparagus, Momordica and Eulophia can be recommended in plant -based diets in Iran and India.[...] Read More.
Keywords: Fiber, carbohydrates, nutritional values, edible plants.
  2020, 19(1), 1-6; 
Full text
Views:1112
Download:2098
Research Article
Full Length Research Paper
Abstract: Measurement of glycosylated hemoglobin has been proposed to be a very sensitive index for glycemic control as various proteins, including hemoglobin, albumin, collagen, low-density lipoprotein cholesterol (LDL), or crystalline proteins has been reported to undergo non-enzymatic glycation in diabetes. In the present study an attempt was made to elucidate the effect of aqueous root extract of Treculia africana on levels of haemoglobin glycosylation and plasma lipid peroxidation in streptozotocin (STZ),-induced diabetic rabbits. Twenty (20) STZ-induced diabetic male rats divided into two groups (n = 10) designated: Control and Test were treated respectively with 20 ml/kg distilled water and 200 mg/kg aqueous root extract of Treculia africana for five weeks. Plasma total haemoglobin, glycosylated haemoglobin and thiobarbituric acid reactive species (TBARS), concentration were determined at pre- and post-treatment. Administration of Treculia africana root extract at 200 mg/kg to STZ-diabetic rabbits was observed to significantly decreased concentration of blood glucose, glycosylated haemoglobin and increased blood total haemoglobin. The elevated plasma levels of lipid peroxidation of diabetic rabbits were reverted back to near control levels following administration of T. africana extract. The results obtained in this study clearly indicate that aqueous root extract of T. africana diminishes the rate of haemoglobin glycosylation in diabetic animals and shows some levels of antioxidant principle.[...] Read More.
Keywords: Haemoglobin, glycosylation, diabetes, extract, glycemic control.
  2020, 19(1), 1-6; 
Full text
Views:1164
Download:1429
Research Article
Eréndira J. Cohen-Fernández*, Francisco F. Pedroche, Mónica Rodríguez Palacios, Sergio Álvarez Hernández and Esther Meave del Castillo
Abstract: A phylogenetic analysis of the Prorocentrum species is presented, that includes the sequences of the large and small ribosomal RNA subunits from 19 cultures from 13 of the 20 species reported in the Pacific coast of Mexico; the results showed that P. micans, P. gracile and P. mexicanum were the closest of species, that planktonic may be more recent than epibenthonic species and it is suggested that the probable ancestor of the Prorocentrum genus could be a round cell without apical spine, toxic and epibenthonic.[...] Read More.
Keywords: Prorocentrum, parsimony analysis, dinoflagellates, LSUrDNA, SSUrDNA.
  2020, 19(1), 1-6; 
Full text
Views:1136
Download:1545
Research Article
Dechassa Duressa*, Khairy Soliman and Ernst Cebert
Abstract: It is well documented that aluminum (Al) toxicity is the most important constraint of crop production on acid soils. Chelation of Al in the rhizosphere with root secreted organic acid anions is a common mechanism of Al tolerance in most plants including soybean. Phenolic substances are recently implicated as additional physiological mechanism of plant Al tolerance. This study was undertaken to investigate the role of phenolics in soybean Al tolerance and to examine protein expression changes in soybean roots under Al stress. An Al-tolerant soybean genotype PI 416937 and Al-sensitive Young were used in the study. Protein and polyphenol profile changes in response to Al stress, were examined in roots tips of hydroponically grown plants 72 h post treatment. Al significantly increased total phenol exudation from roots of the Al tolerant genotype PI 416937, whereas, flavonoid content did not vary with treatment. Al also altered the expression level of several proteins in genotypic and non genotypic specific manner. This is the first study to show that polyphenol is involved in soybean Al tolerance. Future research should consider quantification of individual flavonoid compounds in root tissue as well as culture solution, and sequencing and functional annotation of Al regulated proteins.[...] Read More.
Keywords: Soybean, aluminum tolerance, protein expression, phenolics.
  2020, 19(1), 1-6; 
Full text
Views:1115
Download:1478
Research Article
Manoj Kumar Bisoyi, Laxmikanta Acharya, Arup Kumar Mukherjee, * and Pratap Chandra Panda
Abstract: Six species of Sesbania were fingerprinted using RAPD and ISSR markers. Both markers yielded a total of 249 bands out of which 243 were polymorphic in nature indicating high degrees of genetic diversity in the genus. Cluster analysis using the combined data revealed segregation of the lone species Sesbania grandiflora from the rest of the species. High boot strap values in the dendrograms show the accuracy and authenticity of the result. All other five species got separated to a distinct cluster. This supports the taxonomic division of the genus Sesbania into Agati Desv. comprising the only species S. grandiflora (Linn.) Poir. and sub-genus Eusesbania Baker containing all other species.[...] Read More.
Keywords: Sesbania, RAPD, ISSR and phenogram.
  2020, 19(1), 1-6; 
Full text
Views:1181
Download:1486
Research Article
Acharya Laxmikanta, * and Chandra Panda Pratap
Abstract: Random amplified polymorphic DNA (RAPD), Inter simple sequence repeat (ISSR) and Amplified fragment length polymorphism (AFLP) markers were used to verify the segregation of the genus Cassia L. (sens. lat.) into three distinct genera namely, Chamaecrista Moench., Senna P. Mill. and Cassia L. (sens.str.). Eighteen representatives of the three taxa were characterized using the molecular markers. 25 RAPD, six ISSR primers and six AFLP primer combinations resulted in the amplification of 612, 115 and 622 bands (loci), respectively. Most of the loci are found to be polymorphic, showing high degrees of genetic diversity among the different taxa studied. The dendrogram constructed on the basis of the RAPD, ISSR and AFLP data using the SHAN clustering, divided Cassia L. (sens. lat.) into three different clusters as Chamaecrista Moench., Senna P. Mill. and Cassia L. (sens.str.). High bootstrap value revealed that all the clusters were stable and robust. It was observed from the present investigation that these genera have their identity at molecular level, which supports the elevation of the genus Cassia L. sens. lat. to the level of sub tribe Cassiinae and segregation into three distinct genera instead of intra-generic categories. In the present study taking the molecular markers into account the trifurcation of the sub tribe Cassiinae could be re-established.[...] Read More.
Keywords: Cassia, molecular phylogeny, RAPD, ISSR, AFLP.
  2020, 19(1), 1-6; 
Full text
Views:1165
Download:1520
Research Article
O. Nwaichi Eucharia* and O. Ayalogu Edward
Abstract: A twelve-week study was undergone to identify selective effects of Mucuna on companion crop plant and to screen Mucuna for capacity to suppress weeds. A 10% (v/w) contamination with Nigerian Bonny light crude oil was simulated for stress tolerance assessment. Mucuna pruriens supported revegetation, soil and water conservation and also contains potentially toxic BTEX and PAHs that are not phytotoxic to itself but suppressed the growth of Sphenostylis stenocarpa and inhibited the growth of weeds. The detrimental influence on crop plant could be linked to the interactions between soil microorganisms and plants at the rhizophere and this conferred competitive advantage on Mucuna. Physiological and environmental stress induced by hydrocarbon contamination, affected the growth performance of Mucuna and decreased the amount of these toxic compounds released. Comparable amount of toxic hydrocarbons were found in Mucuna grown in uncontaminated treatments confirming its natural composition. Growth indices measured as plant height, leaf area and dry weight, confirmed allelopathic suppression on crops. Allelopathic chemicals persisted in some neighbouring plants as those planted in succession. Although produced allelochemicals acted as herbicides, it may also have undesirable effects on non-target species thus the need for prior ecological studies.[...] Read More.
Keywords: Allelopathy, contamination, germination, growth, interplant, Mucuna, toxicity, weed.
  2020, 19(1), 1-6; 
Full text
Views:1211
Download:1628
Research Article
Kumar Arun*, P. C. Mali and V. K. Manga
Abstract: Downy mildew or green ear disease of pearl millet caused by Sclerospora graminicola is the most destructive disease. Affected plants produce green ear with various types of proliferations and malformation of the panicle. Deranged physiology of susceptible and resistant varieties is governed by genetic base, pathogen virulence and induced resistance. Phenolic compounds have been noticed most influential secondary products in determination of resistance in pearl millet plants. In relation to this, activities of polyphenol oxidase (PPO), peroxidase (POX), catalase (CAT) and IAA oxidase (IAAO) have also been found deranged considerably in the downy mildew affected plants of susceptible and resistant cultivars. The study suggests that accumulation of total phenols and OD-phenols caused the hyperphenolicity in infected resistant host tissues despite increased activities of POX and PPO. Total amino acids and free proline contents were increased manifold (1222.2 and 942.6%, respectively) in diseased tissues, particularly in resistant cv. HHB 67 than in susceptible one (Eknath), indicating biotic stress caused by S. graminicola. The role of enzyme activities and their related compounds have been discussed in the present paper.[...] Read More.
Keywords: Pearl millet, downy mildew, Sclerospora graminicola, metabolites, oxidative enzymes, hyperphenolicity.
  2020, 19(1), 1-6; 
Full text
Views:1223
Download:1641
Research Article
O. O. Oyedapo*, B. A. Akinpelu, K. F. Akinwunmi, M. O. Adeyinka and F. O. Sipeolu
Abstract: Anti-inflammatory activity of extract of Lantana camara, Linn and its fractions was investigated using stabilization of red blood cell membrane lysing technique. Phytochemically, whole plant extract (WPE) and ethanol fraction (EF) gave positive reactions for the presence of saponins, tannins, flavonoids and cardiac glycosides. The ethyl acetate fraction (EAF) gave reactions for the presence of flavonoids while butanol fraction (BF) gave positive test for the presence of saponins. The percentage membrane stability exhibited by the extract and various fractions was concentration dependent and compared favorably with those of standard drugs (Ibuprofen and Indomethacin). The results revealed that both ethanol and ethyl acetate fractions contained principles that protected the erythrocyte membranes effectively. Moreover, ethyl acetate fraction provided highest protection against induced lyses and exhibited both monophasic and biphasic responses at all the concentrations assayed. The possible mechanism of action of the extract and fractions is described and discussed.[...] Read More.
Keywords: Membrane, stabilization, anti- inflammatory, Lantana camara.
  2020, 19(1), 1-6; 
Full text
Views:1437
Download:1749
Research Article
Ahmad Khan* and Shad Khan Khalil
Abstract: An area of plant science that is still unexplored is how leaf area affects crop dry matter production due to aeration of seed in osmoticum. In view of this, an experiment was conducted at Agricultural Research Farm of NWFP Agricultural University, Peshawar, Pakistan in the summer of 2003 and repeated in 2004. The seeds of two mung bean cultivars (NM-92 and NM- 98) were primed, some for 6 h and others for 12 h in using either distilled water (0MPa osmotic potential) or Polyethylene glycol-8000 (PEG) solution having -0.2, -0.5 and -1.2 MPa osmotic potential. A control treatment (dried seeds) was also included in the experiment. The primed seed were dried back, till the weight become constant and were store for sowing at 25°C. Data was collected on mung bean leaf area, dry matter production and growth parameters at different growth stages. Seed moisture content at maturity stage was also determined. There was no significant difference in leaf area for the different cultivars and seed treatment duration also did not lead to a significant difference in leaf area. However, seed priming techniques significantly affected the measured parameters. Dried seed had developed lower leaf area and dry matter compared to primed seeds. An exponential linear model of leaf area and total dry matter revealed that dry matter production was linearly related to leaf area (r2 = 77.23). The linear relationship between the leaf area and dry matter hold true our hypothesis and thus we concluded that beside environmental and genetical factors, the dry matter production is a function of leaf area in aerated seed of mung bean crop in semi-arid areas like North western Pakistan.[...] Read More.
Keywords: Mung bean, priming, growth, dry matter and leaf area.
  2020, 19(1), 1-6; 
Full text
Views:1190
Download:1662
Research Article
Law-Ogbomo, K. E.*, Remison, S. U. and Jombo, E. O.
Abstract: A field study was conducted at the Teaching and Research Farms of the University of Benin, Benin City, Nigeria in 2007 and 2008 to evaluate the effect of palm oil mill effluent and NPK fertilizer on the performance of Amaranthus cruentus. The trial involved three levels of palm oil mill effluent (0. 5 and 10 t ha-1) and three levels of NPK (0, 150 and 300 kg ha-1) using a factorial arrangement fitted into randomized complete block design and replicated three times. Results revealed that the effluent and NPK fertilizer had positive effects on dry matter partitions, relative yield, relative agronomic effectiveness and chlorophyll content of A. cruentus. Integration of 5 t POME and 300 kg NPK ha-1 had the optimum total dry matter (9.65 t ha-1), relative yield (2.08), relative agronomic effectiveness (1.91) and total chlorophyll content (58.80 mg g-1).[...] Read More.
Keywords: Amaranthus cruentus, chlorophyll content, dry matter, relative agronomic, effectiveness.
  2020, 19(1), 1-6; 
Full text
Views:1184
Download:1648
Research Article
Mohamed Mahgoub Azooz,*, Ashraf Mohamed Youssef and Parvaiz Ahmad
Abstract: Exogenously applied salicylic acid has been shown to be an essential signal molecule involved in both local defense reactions and induction of systemic resistance response of plants after salt stress. Our study was aimed at evaluating the foliar spray with different levels (0.0, 0.5 and 1.0 mM) of salicylic acid (SA) on broad bean (Vicia faba L) seedlings grown under diluted seawater on growth and some related physiological responses. Seawater irrigation negatively affected growth parameters, free amino acids and K+, while the contents of soluble sugars and protein, proline, Cl , Na+, ion leakage, lipid peroxidation and antioxidant enzyme activities were significantly increased. Foliar spray with SA improved all growth parameters and increases the activities of antioxidant enzymes. On the other hand, plants treated with SA had lower Cl and Na+, while K+ had a reverse pattern. Based on our findings, the effectiveness of SA in inducing seawater stress tolerance depends upon the concentration of SA applied. The inducer effect of SA was greater with 1 than 0.5 mM treatment. This effect includes the stimulation of antioxidant enzyme activities and regulation of osmotic adjustment through accumulation of osmotic solutes and regulation of absorption and distribution of inorganic ions.[...] Read More.
Keywords: Antioxidant enzyme activities, inorganic ions, proline.
  2020, 19(1), 1-6; 
Full text
Views:1318
Download:1574
Research Article
A.  Jason Morales, Prabin Bajgain, Zackary Garver, Peter J. Maughan and Joshua A. Udall*
Abstract: Physiological responses to salt stress were measured in Chenopodium quinoa, a regionally important halophytic staple crop of Andean South America. In a greenhouse experiment, salt (NaCl) was applied to quinoa varieties, Chipaya and KU-2, and to the model halophyte Thellungiella halophila to assess their relative responses to salt stress. Height and weight data from a seven-week time course demonstrated that both C. quinoa cultivars exhibited greater tolerance to salt stress than the model plant T. halophila in these specific conditions. In a separate growth chamber experiment, two quinoa cultivars (chipaya and ollague) adapted to saline soils and one quinoa cultivar (CICA-17) adapted to a lower elevation were grown hydroponically and evaluated for physiological responses to four salt stress treatments. Tissues collected from the growth chamber experiments were used to obtain leaf water content, tissue ion concentrations, compatible solute concentrations, and RNA for real-time PCR. High levels of trigonelline, a known osmoprotectant, were found to accumulate in the high salt treatment suggesting a key role in salt tolerance of quinoa. The expression profiles of genes involved in salt stress, showed constitutive expression in leaf tissue and up-regulation in root tissue in response to salt stress. These data suggest that quinoa tolerates salt through a combination of salt exclusion and accumulation mechanisms.[...] Read More.
Keywords: Salt stress, quinoa, Thellungiella halophila, trigonelline, osmoprotectant.
  2020, 19(1), 1-6; 
Full text
Views:1518
Download:1669
Research Article
Mona M. Abdalla
Abstract: Salt toxicity is one of the major problems in modern agriculture. Plants can employ silicon as a protective agent against stresses and the mechanisms of this process remain unknown. Two Egyptian clover (Trifolium alexandrinum) cultivars differing in salinity tolerance were used (Helaly, salt sensitive and Sarw1, salt tolerant). They were grown in pots filled with normal and saline soil (2000 and 3000 ppm) in the absence or presence of diatomites (0, 1.5, 3 and 4.5 g/kg soil). Results indicated that diatomite significantly offset the negative impacts of salinity and increased tolerance of sensitive cultivar of clover (Helaly) to salinity stress. Salinity decreased markedly all measured growth parameters (plant height and fresh and dry weight of fodder/pot), photosynthetic rate , the percentage of relative water content (%RWC), percentage of membrane stability index (%MSI), total photosynthetic pigment, and the contents of each of magnesium (Mg), potassium (K), phosphorus (P), and calcium (C) while it increased the levels of both amino acids, proline and sodium (Na) in both T. alexandrinum cultivars, however the effect was more profound on the sensitive line. Addition of diatomite at an upgraded rates solely or combined with both concentrations of NaCl significantly increased the above measured growth parameters, photosynthesis, %RWC, %MSI, total pigment and the accumulation of each of Mg, K, P and Ca. Moreover, it synergistically increased the content of total amino acids while, on the other hand, reduced the contents of proline and Na. Notably, the impact of diatomite in mitigating the deteriorative effect of salinity was clearly manifested more in sensitive lines of clover than in tolerant ones and under the higher dose of salinity (3000 ppm) as compared to the lower dose (2000 ppm). Moreover, diatomite fertilization either alone or interacting with salinity induced two distinctive protein electrophoratic bands (233 and 25 KD) which were absent in either the control or salinity stressed cultivars. In this respect, diatomite was most effective at 3 g/kg on Helaly and 4.5 g/kg on Sarw1 imposed to the higher dose of salinity (3000 ppm). Diatomite application either alone or combined with salinity induced several distinguished amplified DNA fragments in both clover cultivars using PCR- RAPD analysis , although the number of induced polymorphic DNA fragments were more in Helaly than in Sarw1. These results indicate that diatomite recovered and improved the morphologic, metabolic and biochemical status of both cultivars under salinity stress and especially the sensitive line (Helaly).[...] Read More.
Keywords: Diatomite, growth, proline, aminoacids, membrane stability index, relative water content, minerals, protein electrophorasis, RAPD-(DNA).
  2020, 19(1), 1-6; 
Full text
Views:1301
Download:1668
Research Article
RATHOD P. J.* and Vakharia D. N.
Abstract: Study was conducted to see the changes in ascorbic acid, free amino acids, proline and total phenol content at different stages of infection of wilt disease in chickpea (Cicer arietinum L) roots tissues. The results indicated that total phenol content was significantly higher in root of all the cultivars obtained from sick plot. The level of phenol declined from pre infection (S1) to post infection stage (S2) and further it increased in all the cultivars among six cultivars tested, JG-62 and GG-1 had lower concentration of total phenol than others. Free amino acid content remarkably decreased with rise in the intensity of wilt disease. Susceptible cultivars had greater reductions in free amino acid content as compared to tolerant cultivars (GG-1 and GG-2) that is (50-52%). Root tissues of different cultivars grown in sick plot possess significantly more amount of free amino acids than the tissues obtained from normal plots at different stages of growth. Ascorbic acids content was significantly higher in chickpea root tissues obtained from normal plot. Susceptible cultivars GG-4 and JG-62 had higher content of ascorbic acid either it was grown in sick soil or normal soil as compared with other cultivars. With the progress of disease from pre infection (S1) to post infection stage (S2), a greater reduction was recorded in root tissues received from sick plot (47%) as compared to normal plot (38%). Interaction effect of TxS showed that the percentage reduction in ascorbic acid content was same from pre infection stage to post infection stage (36%) in root tissues from both sick and normal plot.[...] Read More.
Keywords: Chickpea, wilt, proline, phenol, free amino acid, ascorbic acid.
  2020, 19(1), 1-6; 
Full text
Views:1286
Download:1668
Research Article
Manish Das
Abstract: An experiment was carried out with Black Isabgol (Plantago indica L) an annual herb cultivated recently as a medicinal plant at Directorate of Medicinal and Aromatic Plants Research (DMAPR) in India, aiming on the effect at different stages of growth under the influence of different sowing dates and spacings on growth, seed yield and seed swelling factor as a part of good agricultural practices (GAP). No detail morpho-physiological work has been carried out in this species including yield. Results revealed that growth and yield were significantly influenced by sowing dates and spacings. The best time for sowing of P. indica was found to be between 15-30th November and the suitable spacing was either 50 or 60 × 15 cm. Swelling factor was not influenced by these factors, however, a positive trend was observed towards suitable date of sowing and spacing. The finding was a step forward towards determining good agricultural practices (GAP) of P. indica, probably an alternative of P. ovata in future.[...] Read More.
Keywords: Plantago indica, Sowing date, spacing, growth, yield, swelling factor.
  2020, 19(1), 1-6; 
Full text
Views:1328
Download:1696
Research Article
Rebeca Patricia Omena-Garcia, Gilberto Costa Justino, Ladaslav Sodek and José Francisco de Carvalho Gonçalves*
Abstract: The characteristics of symbiotic nitrogen fixation in tropical forest tree species have received little attention but it is well established that mineral N negatively affects symbioses in crop legumes such as soybean and common bean. Nevertheless, ecophysiological mineral nitrogen dynamics in terms of nitrogen xylem transport of native Amazonian legume has been not documented so far. The objective of this study was to evaluate nodulation and amino acid xylem transport of Inga edulis, a tropical Amazonian perennial legume, in response to mineral N. Plant growth, nodule number, nodule dry weight and xylem sap amino acid contents were determined in nodulated I. edulis in response to nutrition with ammonium, nitrate or no mineral N (total dependence on N2 fixation). In addition, free individual amino acids were quantified in the different plant tissues and in the xylem. Plant growth (total dry weight) responded significantly to both nitrate and ammonium, especially the latter. Nitrate negatively affected nodulation and total amino acid transport to the shoot while ammonium increased nodule dry weight, but not total amino acid contents of the xylem which diminished. On the other hand, mineral-N showed only discrete changes in the amino acid composition of the xylem where asparagine was the predominant form. Our results suggest that I. edulis responds to ammonium nutrition through greater plant and nodule growth compared to the other N sources, consistent with ammonium being the principal source of mineral N in the acid soils of the natural habitat of this species.[...] Read More.
Keywords: Tropical tree species, nitrogen fixation, glutamine, symbiosis.
  2020, 19(1), 1-6; 
Full text
Views:1341
Download:1763
Research Article
Odenigbo, U. M.* and Otisi, C. A. O.
Abstract: Some positive health benefits have currently been attributed to coconut intake. An attempt has been made to determine the fatty acids and phytochemical contents of coconut seed flesh collected from the different parts of Nigeria. The fatty acid composition was determined by gas chromatography while phytochemical content was detected using the polar and non polar solvents. The findings revealed that samples from eastern Nigeria had highest fatty acids (caprylic: 8.60±0.00%; lauric: 41.30±0.14%; palmitic: 13.00±0.14%, and stearic: 3.6±0.07%) contents. The fats and oil constituent of coconut was more of lauric acid (37.40-41.30%), a medium chain fatty acid considered to be responsible for the many health benefits attributed to coconut consumption. Both solvents used in determination of phytochemicals revealed the presence of alkaloid, resins, glycosides, terpenoids and tannins in all the Nigerian coconut samples. However, saponin was found present in coconut when polar solvent was used while Flavonoids, steroids and acidic compounds were absent with the use of both polar and non polar solvents. The detected phytochemical and beneficial fatty acids revealed that Nigerian coconut seed flesh should be regarded as one of the functional foods in our diets. Thus, the use of coconut seed flesh in our diets should be encouraged for health supporting functions.[...] Read More.
Keywords: Coconut, fatty acids, phytochemicals, functional foods.
  2020, 19(1), 1-6; 
Full text
Views:1467
Download:1704
Research Article
Mahdi Eskandari
Abstract: Drought stress is the most significant factor that reduces crop yield and is used as a drug. Using materials such as a plant growth regulator (Brassinosteroids) is a practical solution to reduce losses. Brassinosteroids steroidal plant compounds are broad biological activities that are able to increase plant performance through changes in plant metabolism and in protecting them against environmental stress. In a greenhouse study that was carried out in Vocational City Center Arsanjan, the impact of three levels of irrigation: field capacity (FC), mild stress (FC2/3) and severe stress (FC1/3) and four concentrations of plant growth regulators: Article 28-Homobrassinolid zero, M 10-10, 10-8 M and 10-6 M digits on some savory characters of Satureja bachtiarica was investigated. The results showed that reducing irrigation to reduce the significant effect it has on growth parameters, including length and root dry weight, stem diameter, branch number, plant height, shoot yield and total yield, was essential. More so, the concentration of 10-8 M 28-Homobrassinolid that was significantly used to increase root dry weight, stem diameter, branch number, plant height, total yield and performance was also essential. Percentage oil increased significantly at 1% by reducing irrigation so that 36% oil in full irrigation increased to 87% in severe stress, and 10-8 M was recorded for the use of hormone. Essential oil yield at 5% level under the influence of irrigation and the use of hormones were the most essential functions related to irrigation and the use of 10-8 M 28-Homobrassinolid and value 32/29 kg/ha, respectively. The relationship of these hormone levels in full irrigation, mild and severe stress significantly increased by 59, 30 and 24% oil yield respectively than the control plants did.[...] Read More.
Keywords: Drought stress, Brassinosteroids, essential oil percentage, shoot yield.
  2020, 19(1), 1-6; 
Full text
Views:1411
Download:2377
Research Article
H.O. Edeoga*, D. E. Okwu and B.O Mbaebie
Abstract: Alkaloids, tannins, saponins, steroid, terpenoid, flavonoids, phlobatannin and cardic glycoside distribution in ten medicinal plants belonging to different families were assessed and compared. The medicinal plants investigated were Cleome nutidosperma, Emilia coccinea, Euphorbia heterophylla, Physalis angulata, Richardia bransitensis, Scopania dulcis, Sida acuta, Spigelia anthelmia, Stachytarpheta cayennensis and Tridax procumbens. All the plants were found to contain alkaloids, tannins and flavonoids except for the absence of tannins in S. acuta and flavonoids in S. cayennsis respectively. The significance of the plants in traditional medicine and the importance of the distribution of these chemical constituents were discussed with respect to the role of these plants in ethnomedicine in Nigeria. Keywords: Medicinal plants, ethnomedicine, phytochemical constituents.[...] Read More.
Keywords: Medicinal plants, ethnomedicine, phytochemical constituents.
  2020, 19(1), 1-6; 
Full text
Views:1415
Download:1901
Research Article
Kemal Dogan, Ismail Celik, Mustafa Gok and Ali Coskan*
Abstract: The effects of different soil tillage methods on rhizobial nodulation, biomass yield (root, shoot and nodule) and nitrogen content of soybean as a second crop have been investigated. The experiment was conducted as a field trial in Cukurova Region, Turkey in 2008. Six different tillage methods have been studied in this research. These methods were conventional tillage with residue (CTR), conventional tillage with burnt residue (CTBR), reduced tillage with heavy disking (RTHD), reduced tillage with rotary tiller (RTR), no- tillage with heavy disking (NTHD) and no tillage with direct seeding (NTDS). At the stage of inflorescence, nodulation was investigated in the root, shoot, and nodule samplings by determining the weights of the samples and analyzing them for nitrogen contents. The results have been statically analyzed by using MSTAT-C package programme. According to the results of the study, under the conventional methods in which deep tillage operations are applied to soil, it has been found out that nodule formation and plant nitrogen contents have been negatively affected. The differences among the applications were found to be statistically significant. In general, the best nodulation has been obtained with NTDS and RTHD plots. Moreover, the effects of other tillage methods on some parameters related with rhizobiyal N2-fixation have caused to considerable decrease on the parameters mentined above.[...] Read More.
Keywords: N2-fixation, soil tillage methods, microbial activity.
  2020, 19(1), 1-6; 
Full text
Views:1340
Download:1730
Research Article
Wei Wang, Fang Wang, Xiaofeng Ji, Shanhong Liu, Cui Yuan, and Mi Sun*
Abstract: The gene of psychrophilic catalase BNC from Antarctic Bacillus sp. N2a was cloned by degenerate PCR and inverse PCR. BNC gene revealed a 1,461 bp open reading frame for a protein with 486 amino acids. The phylogenetic tree based on the amino acid sequences of BNC and representative psychrophilic microbial catalases manifested that BNC belonged to the Group III of the monofunctional catalase. The active-site residues of the structure-determined catalase were highly conserved in BNC. Comparison of the amino acid composition of BNC with its mesophilic homologue from Bacillus subtilis TE124 showed that BNC had properties of a cold-active enzyme.[...] Read More.
Keywords: Antarctic Bacillus, monofunctional catalase, cold-adapted enzymes, gene cloning.
  2020, 19(1), 1-6; 
Full text
Views:1339
Download:1642
Research Article
Linzhu Ren, Lin Wang, Yunzhi Ma* and Xinglong Wang
Abstract: The complete genome of the foot-and-mouth disease virus (FMDV) strain WFL was cloned and sequenced. The results showed that the complete genome was 8155 nucleotides (nt) in length (including the poly(C) tract, but excluding poly(A) tail) and was composed of a 1059-nt 5'-untranslated region (UTR), a 6969-nt open reading frame, and a 127-nt 3'- UTR. cre region of 5’UTR was 55nt with 45.5% of G/C, and had a stem-loop. The stem -loops region of 3’UTR can fold into two stem -loops, SL1 and SL2. A phylogenetic tree was constructed based on complete amino acids sequences of WFL strain and reference strains. The strains were divided into 4 clusters. O/ES/2001, HKN/2002, LZ and WFL strain can be divided into one group. It was obvious that WFL strain had a close relationship to LZ strain, which indicated that the WFL strain was of serotype O. There were 16 different deduced amino acid residues between the WFL strain and the LZ strain.[...] Read More.
Keywords: Food-and-mouth disease virus, sequence, complete genome, untranslated region (UTR).
  2020, 19(1), 1-6; 
Full text
Views:1378
Download:1684
Research Article
Nkwatoh Athanasius Fuashi *, Labode Popoola , Iyassa Sabastine Mosua , Nkwatoh Ferdinand Wehmbazeyi , Ndumbe Njie Louis and Ewane Marcus Elah
  2020, 19(1), 1-6; 
Full text
Views:972
Download:1172
Research Article
Canan HECER and Metin GULDAS*
Abstract: In this study, effects of chlorine dioxide (0.3 and 0.5%), lactic acid (0.5 and 1.0%) and fumaric acid (0.5 and 1.0%) on the shelf-life of broiler wings were investigated. The samples were dipped into the experimental solutions for 10 min. and stored at +4°C for 9 days. Microbiologically, the counts of total aerobic mesophilic bacteria (TAMB), total psychrophilic bacteria (TPB) and ESCHERICHIA COLI were determined and pH values were measured. Compared to the control samples, the TAMB counts were reduced approximately as 13% with chlorine dioxide, 13.5% with lactic acid and 10.5% with fumaric acid. The most effective bacterial reduction on E. COLI was observed in the samples treated with 1.0% of lactic acid as 56 and 1.0% of fumaric acid as 34%. Statistically, the changes determined in the TPB counts were not significant (P>0.05), however they increased as 6 and 7% during the storage. Throughout the storage, the bacterial growth was reduced parallel to the concentration of the chemicals increased. The shelf-life of broiler wings was prolonged 4 days by the experimental solutions. Neither off-flavor nor a negative effect was observed on the sensorial properties by the panelists due to chemical applications.[...] Read More.
Keywords: Broiler, chlorine dioxide, lactic acid, fumaric acid, antimicrobials.
  2020, 19(1), 1-6; 
Full text
Views:955
Download:1247
Research Article
Yong-Yu Zhang*, Zheng-hao Chen, Zhuo Zhen and Jun Yang
Abstract: Eddy pumping is a process by which mesoscale eddies induce isopycnal displacements that lift nutrient-replete waters into the euphotic zone, driving a set of biogeochemical processes in the ocean. To investigate the potential effect of physical processes on the microbial community functions, the microbial community metaproteomic profiles were determined in a cold-core cyclonic eddy in the South China Sea (SCS). The significant differences of metaproteomic patterns accurately predicted their distinct functional responses to environmental changes caused by the mesoscale cyclonic eddy perturbations. From the protein gel profiles, 11 proteins were successfully identified by MALDI TOF MS/MS, including nitrogen regulatory proteins, ribosomal proteins and substrate transport proteins, etc, which implied the metabolic responses of the microbial populations to the nutrients change within the cyclonic eddies. These results highlight the potential of metaproteomics for studying complex microbial consortium in the ocean and contributed to our understanding of the biological consequences of a mesoscale cyclonic eddy in the SCS.[...] Read More.
Keywords: Cyclonic eddy, metaproteomics, microbial community.
  2020, 19(1), 1-6; 
Full text
Views:943
Download:1168
Research Article
Imran Khan, Puja Gupta and Jyoti Vakhlu*
Abstract: An extra-cellular thermo-alkaliphillic protease producing Bacillus was isolated from the soil and identified to be Bacillus tequilensis MTCC 9585 by microscopic, colony morphology, biochemical and 16S ribotyping. B. tequilensis MTCC 9585 produces protease up to 21 h of growth but interestingly 90% of the protease production occurred, just after 6 h of growth. The organism grew as well as and produced enzyme at wide pH (5 to 12) and temperature range (4, 25, 37 and 50°C), though optimum temperature and pH for the growth of the Bacillus were 37°C and pH 7.0. Optimum pH for enzyme activity coincided with optimum pH for enzyme production at pH 10. Optimum temperature for enzyme activity was 60°C and the enzyme stayed stable over the period of 270 days (9 months) at 10°C. Metal ions like Ca2+, Mg2+, K+ increased the enzyme activity whereas Cu2+, Zn 2+ inhibit the activity slightly. Wash performance and stain removal efficiency increased when partially purified enzyme was used in conjunction with selected detergent. B. tequilensis can be a potential candidate for use in detergent industry because: of couple of reasons such as (i) 90% of the protease is produced only after 6 h of growth (economically viable), (ii) it’s activity in wide pH and temperature range (iii) it’s stability over the period of 9 months at 10°C indicating good shelf life and (iv) detergent compatibility.[...] Read More.
Keywords: Bacillus tequilensis, alkaline protease, pH, temperature, detergent compatibility.
  2020, 19(1), 1-6; 
Full text
Views:961
Download:1210
Research Article
Salama M. Abdel Hafez, Khaled A. Abd El-Razik*, Hany M. Hassan and Ibrahim Gad
Abstract: Brucellosis is an important disease affecting mainly sheep and goats. Diagnosis based on isolation of Brucella organisms from the suspected animals is the golden standard but has a limited sensitivity, expensive and unpractical to apply on a large scale in control campaigns. Accordingly, the indirect diagnosis of disease based on serological tests is the method of choice in the eradication programs. In this study, a single step polymerase chain reaction (PCR) was used to diagnose brucellosis using sheep whole blood and compared its sensitivity and specificity against some of the most commonly used serological techniques and modified ones. Three hundred apparently healthy ewes were randomly chosen from different governorates of Egypt. Sera were tested against Rose Bengal test (RBT), Serum Agglutination test (SAT), ELISA using both the whole Brucella antigen (W-ELISA) and the periplasmic protein antigen (P-ELISA). Results showed that 39% of the blood samples were positive to the PCR test, Meanwhile 29.3, 27.0, 28.7 and 28.3% were positive to the previous serological tests respectively. We recommend the use of this blood PCR assay for accurate diagnosis of ovine brucellosis especially in the early stage of infection, which is difficult to achieve by the applied serological tests.[...] Read More.
Keywords: Ovine brucellosis, Blood PCR, RBT, SAT, ELISA.
  2020, 19(1), 1-6; 
Full text
Views:944
Download:1190
Research Article
Ivana D. Radojević*, Milan S. Stanković, Olgica D. Stefanović, Marina D. Topuzović, Ljiljana R. Čomić and  Aleksandar M. Ostojić
Abstract: In vitro antifungal activity of methanol, acetone and ethyl-acetate extracts from Equisetum telmateia Ehrh., Allium flavum L., Sedum acre L., Sideritis montana L., Marubium peregrinum L. and Xeranthemum anuum L. grown in Serbia, were investigated by microdilution method. Minimum inhibitory concentration (MIC) and minimum fungicidal concentration (MFC) have been determined. Testing was conducted against four Aspergillus species - A. flavus, A. fumigatus, A. niger and A. restrictus. All statistical analyses were performed using SPSS package. The tested extracts showed significant antifungal activity against A. restrictus and moderate activity against other Aspergillus spp. The best results showed ethyl acetate extract of S. montana, X. anuum and S. acre.[...] Read More.
Keywords: Antifungal activity, plant extracts, Aspergillus spp.
  2020, 19(1), 1-6; 
Full text
Views:1107
Download:1222
Research Article
Shahzad Akbar Khan*, Tarique Hussain, Muhammad Akhtar Qureshi, Gulzar Ahmed, Sarfaraz Ali Fazlani, Ijaz Ahmed and Farhan Anwar Khan
Abstract: Indirect Haemaglutination test is a reliable quantitative serological test for measuring antibodies against angara disease. The etiological agent contained in the liver of affected chick did not directly haemaglutinate erythrocyte of chickens. The antibody titre measured through IHA varied from 1:8-1: 128, in the sera (samples) of experimentally infected chickens at days 7, 14 and 21 post vaccination.[...] Read More.
Keywords: Haemagglutination, titre, sera, angara disease.
  2020, 19(1), 1-6; 
Full text
Views:1069
Download:1442
Research Article
Efuntoye M. O.*, Bakare A. A. and Sowunmi A. A.
Abstract: A total of 34 isolates of bacteria, 20 Staphylococus aureus and 14 Clostridium perfringens from leachate samples, were investigated for virulence factors and antibiotic resistance. Majority (>70%) of the isolates produced enterotoxins. Many of the S. aureus isolates tested positive for deoxyribonuclease, haemolysins and slime production. Staphylococcal enterotoxin A (SEA) was the predominant enterotoxin produced by the S. aureus. None of the S. aureus was resistant to ciprofloxacin, novobiocin and vancomycin. Six isolates were resistant to methicillin and majority of them were resistant to penicillin, ampicillin and bacitracin. Eleven (78.6%) of the C. perfringens isolates produced enterotoxin and were also beta haemolytic. Except for one strain each of C. perfringens which were resistant to penicillin and ampicillin-sulbaltam respectively, all others were susceptible to the antibiotics tested. The presence of several of the virulence traits investigated and resistance to commonly used antibiotics in many of the S. aureus and C. perfringens tested raises concern about their dissemination through leachate to the environment. The accumulation of leachate and possible contamination of surface and groundwater sources also points out its potential risk for public health. There is need for some measures to properly manage waste and consequently reduce surface and groundwater contamination through leachate percolation.[...] Read More.
Keywords: Virulence factor, landfill leachate, antibiotic resistance, Staphylococcus aureus, Clostridium perfringens, health impact.
  2020, 19(1), 1-6; 
Full text
Views:1068
Download:1379
Research Article
A.  K. Al-Ghamdi, S. M. A. Abdelmalek* A. M. Ashshi, H. Faidah, H. Shukri  and A. A. Jiman-Fatani
Abstract: This study aims at investigating the status of bacterial contamination of four daily used objects, computer keyboards, computer mice, elevator buttons and shopping carts handles. A total of 400 samples were collected from 4 different objects; 100 from each. Samples were collected from different places (offices, internet cafes, homes, buildings and supermarkets) in the city of Jeddah, Saudi Arabia. 95.5% of the total samples collected were contaminated with mixed bacterial growth. Coagulase-negative staphylococci dominated the isolates. The second most common bacterial growth in all specimens was Gram-positive bacilli. Potential pathogens isolated from all specimens were: Staphylococcus aureus, Pseudomonas spp. and Gram negative bacilli. Results indicate that internet café computer keyboards and mice showed 100% contamination in comparison with other objects. The presence of pathogenic and commensal bacteria on the four objects indicates that they might act as environmental vehicles for the transmission of potentially pathogenic bacteria.[...] Read More.
Keywords: Bacterial contamination, computers, public surfaces.
  2020, 19(1), 1-6; 
Full text
Views:1173
Download:1613
Research Article
Rong Chen, Xiaopu Yin, Chunna Yu, Qiuyan Wang, Xiaori Zhan and Tian Xie*
Abstract: The gene encoding a thermophilic group 3 alcohol dehydrogenase from Thermotoga lettingae TMO was cloned and over-expressed in Escherichia coli. The full-length DNA sequence of TlADH was 1086-bp encoding a polypeptide of 361 amino acids. Comparative and bioinformatic analysis revealed that TlADH showed high similarity to group 3 ADHs from thermophilic and mesophilic alcohol dehydrogenases, but relatively highest similarity to T. maritime 1, 3-propanediol dehydrogenase. The optimal pH-values of butanol oxidation and butylaldehyde reduction of TlADH were 11.9 and 6.0, respectively. Kinetic parameters of the enzymes showed TlADH preferred NADP+ to NAD+ as a cofactor. TlADH can catalyze a range of primary alcohols oxidation, while it was inactive towards branched-chain alcohols and cyclitol. TlADH also can reduce aldehydes to corresponding alcohols, including aliphatic and aromatic aldehydes. It showed higher activity of aldehyde reduction than that of alcohol oxidation that may be relative to reactive aldehyde detoxification in cell metabolism. In the case of external ions addition we found a 5.23-fold increase in reaction activity by the adding of 1 mM MnCl2. T. lettinga ADH was cloned and overproduced in a mesophilic heterologous expression system, and the recombinant enzyme was characterized. It will be helpful to understand more about the physiological role of group 3 alcohol dehydrogenase.[...] Read More.
Keywords: Group 3 ADH, bioinformatic analysis, recombinant expression, thermophilic, catalytic properties.
  2020, 19(1), 1-6; 
Full text
Views:1093
Download:1305
Research Article
Yi Zhan, Quan Xu, Hongxia Liu, Yunpeng Wang* and Jianhua Guo
Abstract: The influence of bacterial suspension concentration on biocontrol efficacies and storage stabilities of three biocontrol agents, including BACILLUS CEREUS AR156, PANTOEA ANANATIS YT11 and PSEUDOMONAS FLUORESCENS ABc9, were studied. The results indicated that biocontrol efficacy and storage stability did not increase along with the enhancement of the concentration of biocontrol agents, and 109 CFU ml-1 of the strain P. FLUORESCENS ABc9, 108 CFU ml-1 of B. CEREUS AR156 and 108 CFU ml-1 of P. ANANATIS YT11 provided the best biocontrol efficacy as 63.06, 49.55 and 52.25% respectively, and the most suitable concentration of the biocontrol agents for preservation ranged from 108 to 109 CFU ml-1.[...] Read More.
Keywords: Biological control, strain concentration, biocontrol efficacy, storage viability.
  2020, 19(1), 1-6; 
Full text
Views:1190
Download:1305
Research Article
Xiao Xiao, Jingling Zhang, Quanyi Zhang, Li Wang, Yafang Tan, Zhaobiao Guo, Ruifu Yang, Jingfu Qiu and Dongsheng Zhou*
Abstract: Due to the production of abundant capsular polysaccharides and or exopolysaccharides, some bacteria form mucoid and opaque colonies on solid agar medium. Polysaccharides interfere with the isolation and characterization of DNA. Extraction of polysaccharide-free DNA from the mucoid bacteria is required for genetic and biochemical studies. In this study, mucoid Vibrio parahaemolyticus and Klebsiella pneumonia were used as model organisms for comparing the effectiveness of two DNA extraction methods. The two methods were proved reproducible and cost-effective for extracting high-purity genome DNA from mucoid bacteria for further applications.[...] Read More.
Keywords: Mucoid bacteria, Vibrio parahaemolyticus, Klebsiella pneumonia, DNA isolation, polysaccharides.
  2020, 19(1), 1-6; 
Full text
Views:1122
Download:1382
Short Communication
Jia-Ying Zhu, Song Yang, Qin-Wen Li and Yong-He Li*
Abstract: Microsatellite as one of the most popular molecular markers provides a useful tool for population genetic structure analysis in insects. But few microsatellite loci have been developed for Lepidoptera. Here we isolated and characterized 9 polymorphic microsatellite loci in Rhyacionia leptotubula (Lepidoptera: Tortricidae). The number of alleles of these loci ranged from 2 to 11. Observed and expected heterozygosities ranged from 0.0000 to 0.5294 and from 0.3905 to 0.8719, respectively. Seven loci show significant Hardy-Weinberg deviations. These loci could provide insight into population genetic structure and dispersal patterns of R. leptotubula.[...] Read More.
Keywords: Rhyacionia leptotubula, microsatellite, population genetics, Lepidoptera.
  2020, 19(1), 1-6; 
Full text
Views:1061
Download:1274
Review
Parvaneh Jafarei* and Maryam Tajabadi Ebrahimi
Abstract: Lactic acid bacteria (LAB) are one of the most applied bacteria in the production of fermented foods, from dairy to fruits and vegetables products. They make food durable, improve food safety, flavor, and texture as well as to enhance food physiological and hygienic value due to the presence of viable cells and valuable. Besides, products obtained by LAB fermentation processes are of special importance for functional foods such as probiotics. Lactobacillus acidophilus is the best well-known species of this Lactobacillus complex in LAB group and exist in the gastrointestinal tracts of humans and animals. In fermented food, the metabolic activity of this microorganism results in production of flavor, and aroma that cause organoleptic properties of fermented foods and inhibits foods spoilage. L. acidophilus effect on modulation of host immunity is proved by clinical evidence but molecular and cellular mechanisms of these effects are not completely clear. Despite the increasing application of this bacterium, little is known about its effects on the gut community, host physiology and immunity. The molecular mechanisms by which L. acidophilus exert these effects are not clearly understood. In this regard, recognition of cell structures and the genomic base of this bacterium could be useful. In this paper we try to gather all the information that exists about this bacterium.[...] Read More.
Keywords: Lactobacillus acidophilus, structure, fermented food, probiotic.
  2020, 19(1), 1-6; 
Full text
Views:1136
Download:1251
Research Article
Jiraporn Nikomtat, Puttinan Meepowpan and Yingmanee Tragoolpua*
Abstract: The methanol and dichloromethane extracts of Inula cappa (Ham. ex D. Don) DC. were evaluated for inhibition of herpes simplex virus infection. Higher anti- herpes simplex virus (HSV) activity of I. cappa methanol extract was observed comparing with I. cappa dichloromethane extract since more than 50% of the virus was inhibited by I. cappa methanol extract and 50% effective doses of I. cappa methanol extract on HSV-1and HSV-2 were 720.1±32.7 and 529.2±5.2 µg/ml respectively. However, when the virus particles were treated with I. cappa dichloromethane and I. cappa methanol extracts, both HSV-1 and HSV-2 particles were directly inactivated to negligible amount within 1 - 2 h. More than 50% interference on blocking of HSV attachment and penetration was observed after treatment the virus with I. cappa methanol extract. Moreover, within 30 h, the effective inhibitory activity of I. cappa methanol extract on HSV replication was higher than that of the I. cappa dichloromethane extract. Both extracts had potent activities in reducing viral deoxyribonucleic acid (DNA) synthesis since HSV DNA after treatment with the extracts were 1.3-2 fold less than HSV DNA control after determination by real time polymerase chain reaction and approximately 45 kilodalton viral proteins were clearly diminished after treatment with I. cappa methanol extract. Therefore, methanol extract of I. cappa is a potent inhibitor of herpes simplex virus infection in vitro.[...] Read More.
Keywords: Anti-viral activity, Inula cappa, plant extract, herpes simplex virus.
  2020, 19(1), 1-6; 
Full text
Views:1130
Download:1308
Research Article
Shangling Fang, Hong Liu , JiangBo Wang and MaoBin Chen*
Abstract: Penicillium sp. was isolated from Daqu as a beginner strain. In order to investigate the role of Penicillium sp. in Luzhou-flavor liquor, Penicillium sp. was operated in Koji seeds and then simulated solid-state fermentation for liquor testing under different conditions. They included adding of different amounts of koji seeds and Daqu. The results showed that, when the amount of Daqu added was 20%, Penicillium sp. koji added increased from 0.5 to 2%, compared to blank control group. Liquor yield was reduced by 2.23% from 29.77%, total ester decreased by 1.70% from 37.25%, total acid increased by 6.57% from 12.41% and four esters had different degrees of decrease trend. While the amount of koji seeds added exceeded 1.0%, ethyl lactate content was higher than ethyl caproate content. When the amount of Penicillium sp. koji added was 1.0%, yield of liquor, total esters, total acid and the four esters were all enhanced with the increase in amount of Daqu.[...] Read More.
Keywords: Penicillium sp., Daqu, Koji seeds, Luzhou-flavor liquor.
  2020, 19(1), 1-6; 
Full text
Views:1042
Download:1256
Research Article
Yi-Ren Jiang, Zhen-Hua Deng, Sheng-Lin Shi, Rui-Sheng Yang, Yan-Zhuo Li, Yu-Xi Duan* and Li Qin*
Abstract: Nosema pernyi is the lethal pathogen of pebrine disease in Antheraea pernyi. We have developed a PCR-based method for detection of N. pernyi using specific primers. The primers were designed by the reported conserved regions of microsporidian SSU rRNA. When the genomic DNA of N. pernyi was used as the DNA template, the specific DNA sequences were amplified by PCR. It was observed that PCR diagnosis of N. pernyi using the three sets of primers provided increased specificity and sensitivity when compared with light microscopy.[...] Read More.
Keywords: Nosema pernyi, Antheraea pernyi, pebrine disease, spores, PCR, detection.
  2020, 19(1), 1-6; 
Full text
Views:1051
Download:1323
Research Article
Lin Ning and Feng-Biao Guo*
Abstract: Predicted highly expressed (PHX) genes were analyzed in five human pathogens with significant translation selection measured by within-group correspondence analysis (WCA). Functional analysis showed that in the five genomes PHX genes involved in protein synthesis, constitute the largest functional category, followed by categories of energy metabolism and protein fate. The gene encoding pyruvate kinase involved in glycolysis was PHX gene in most genomes except Bacillus anthracis Ames, which preferred strictly aerobic environment. Special PHX genes were also found, such as genes encoding phosphotransferase (PTS) system mainly appeared in Streptococcus pneumoniae genome. The analysis of virulence factors indicates that only a few pathogenicity-related genes were predicted as PHX. This is contrary to previous observations of phytopathogens, where most virulence related genes were PHX. The PHX genes may provide potential drug targets for the design of new bactericide. Specially, PHX virulence factors may help for the understanding of the crucial mechanism of virulence of the bacterial pathogens when invading human body.[...] Read More.
Keywords: Highly expressed genes, human pathogen, E(g) measure, CAI; virulence related genes, inorganic pyrophosphatase.
  2020, 19(1), 1-6; 
Full text
Views:1069
Download:1292
Research Article
Full Length Research Paper
Abstract: RHIZOCTONIA SOLANI is one of the most important soil-borne fungal pathogens that attack the roots of plant and causes significant damage to different plants particularly to chickpeas (CICER ARIETINUM L.). The aim of this work is to study the antagonistic activity of different RHIZOBIUM strains against R. SOLANI in dual culture IN VITRO and under greenhouse conditions. The benefits of rhizobial inoculant in nitrogen fixation, phosphorous uptake and on plant growth promoting were demonstrated with 42 RHIZOBIUM strains. Among the 42 strains tested, 24 isolates had effective control on R. SOLANI IN VITRO. In order to study the biological control mechanisms, the RHIZOBIUM strains ability to produce volatile compounds and to solubilise phosphate were investigated. The results showed that 10 strains were able to solubilise phosphorus and 13 strains produced volatile compounds. In pot trials, the percentage of chickpea plants inoculated with different rhizobia showed significant reduce of root rot symptoms compared to the control growing in uninoculated soil. Among these rhizobiums, the strain S27 proved efficient against the soil borne pathogen IN VITRO and in pot experiments. Our study suggested that inoculation with specific RHIZOBIUM exerts significant disease suppress against R. SOLANI in controlled conditions.[...] Read More.
Keywords: Rhizobium, Rhizoctonia solani, chickpea, plant growth promotion, biological control.
  2020, 19(1), 1-6; 
Full text
Views:1067
Download:1280
Research Article
Full Length Research Paper
Abstract: Soil reaction (pH) is important property soil for crop productions. Many chemicals as ameliorates are required to make soil productive. In organic agriculture, bio-ameliorates are prerequisite. Rhizobia are acid producers and Bradyrhizobia are alkali producers. Rhizobia and Bradyrhizobia are used as ameliorate to study their impact on soil reaction (pH) in laboratory conditions for 21 days. It was observed that Rhizobia decreased soil pH and Bradyrhizobia increased soil pH during incubation.[...] Read More.
Keywords: Acid producers, alkali producers, brardyrhizobia, soil pH, rhizobia.
  2020, 19(1), 1-6; 
Full text
Views:1112
Download:1465
Research Article
Nighat Naheed*, Nazia Jamil and Shahida Hasnain
Abstract: Polyhydroxyalkanoates (PHA) are the biodegradable polyesters produced by bacteria to overcome the environmental stress. Contaminated environments have a large number of bacteria which can accumulate PHA as their energy reserves. Molasses, oil/ghee and sewerage contaminated soils were selected for the screening of biodegradable plastic- producing bacterial strains. The selected contaminated environments showed great diversity of bacterial flora, PSEUDOMONAS (39.39%) being the most common. The 54 bacterial isolates were further screened by Sudan Black B staining after 48 h of incubation on polyhydroxyalkanoates (PHA) - detection media with glucose as a carbon source and Nile Blue A viable colony staining method. The PHA granules could not be detected in 6 bacterial isolates (AS1, AS2, AP2, AP1, LS13 and VM1). In soil samples contaminated with molasses (sugar industry waste), 95% and in samples contaminated with oil/ghee industry waste all bacterial isolates showed PHA accumulation ability. The accumulated PHA was extracted by direct addition of sodium dodesyl sulphate (SDS). The bacterial isolates SM5, SM11, PG5, UOS2, LS10, AP4 and LS3 accumulated more than 50% PHA of their wet cell mass. No correlation was observed between bacterial growth and the PHA production. The bacterial strains showed multiple resistant markers for selected antibiotics (penicillin and streptomycin) and heavy metals (copper and cadmium). A high level of resistance was observed for penicillin (100 - 4500 µg/ml) and copper (1.5 - 17 mM/ml) in PHA- producing strains.[...] Read More.
Keywords: Biodegradable plastic, polyhydroxyalkanoates, molasses, oil/ghee, contaminated soil.
  2020, 19(1), 1-6; 
Full text
Views:1050
Download:1315
Research Article
Iniya Kumar*, M. A. Ramalakshmi, U. Sivakumar, P. Santhanakrishnan and Xinmin Zhan
Abstract: Biodiesel is an alternative renewable fuel and its production rises rapidly. Microbial oils produced by oleaginous microorganisms can be used as a feedstock for biodiesel production so as to sustain the increasing demand for biodiesel and alleviate the competition with the food supply. This study investigated oil production by an oleaginous fungus, Mortierella sp., which was isolated from soils of Tamil Nadu in India. The flask culturing experiment shows that the optimal lipid production conditions were glucose as the carbon source (0.16 M), yeast extract (one percent) as the nitrogen source, temperature at 30°C and pH of 6.5. Under the optimal conditions, the oil production potential of Mortierella sp was examined in a three-litre pilot-scale fermentor. The fungus accumulated 44.1% of lipids in dry biomass and the biomass growth was 15.9 g l-1. The fungal oil contained oleic acid of 38.2%, stearic acid of 11.5%, linolenic acid of 4.8% and palmitic acid of 19.6%, and its fatty acid composition was similar to that of vegetable oils. The crude oil had properties: density of 920 Kg/m3 at 15°C, viscosity of 54.81 mm2/s at 40°C, flash point of 218°C, pour point of 7.0°C, water content of 3.9%, ash content, 0.62%, carbon residue of 0.082%, acid value of 28.22 Mg KOH/g, calorific value of 32.05 MJ/Kg, free fatty acid of 14.55, and fire point of 230°C. The oil properties were much similar to Jatropha oil and rapeseed oil.[...] Read More.
Keywords: Biodiesel, microbial oil, Mortierella sp, oleaginous fungi.
  2020, 19(1), 1-6; 
Full text
Views:996
Download:1272
Research Article
Majid Sadeghi*, Mohammad Hasan Bozorgemehrifard, Hadi keyvanfar, Hassan Momtaz, Abdolhamid Shooshtari and Saied Charkhkar
Abstract: Avian infectious laryngotracheitis (ILT) is a severe clinical respiratory disease of chickens and causes the clinical symptoms of difficulty in breathing and bloody coughing and as if involves laying hens affect the egg production. Two different regions of the infected cell protein 4 (ICP4) gene of infectious laryngotrucheitis virus (ILTV) were amplified and sequenced for characterization of field isolates and tissue culture-origin (TCO) and chicken embryo-origin (CEO) vaccine strains. Phylogenetic analysis of the two regions showed no differences in nucleotide and amino acid sequences between Iranian field isolates with high morbidity and nearly 30% mortality and CEO attenuated vaccines. These findings suggest that modified-Live (ML) ILT vaccine viruses may increase in virulence after bird-to-bird passages.[...] Read More.
Keywords: Avian infectious laryngotracheitis, infected cell protein 4, phylogenetic analysis.
  2020, 19(1), 1-6; 
Full text
Views:992
Download:1289
Research Article
Full Length Research Paper
Abstract: In our previous studies, Rat-1 cells treated with Vibrio parahaemolyticus thermostable direct hemolysin (TDH) developed morphological changes including shrinkage and rounding of the cells. Such alterations suggest that TDH stimulates reorganization of the cellular cytoskeleton. In the current study, the effects of TDH on actin cytoskeleton, chromatin, and caspase-3 were evaluated. Rat-1 cells treated with TDH 5 µg/ml showed redistribution of actin with loss of stress fibers, a floccular staining pattern, cellular membrane blebbing, and cell rounding as assessed by fluorescent actin-staining. This actin redistribution was time dependent. Actin was rapidly disappeared within 10 min after TDH exposure, and the maximal effect was detected by 30 min. TDH-treated cells also showed chromatin condensation which is time dependent. The changes were also detected by as early as 10 min, with the maximal effect by 20 min. Moreover, caspase-3 was activated in TDH-treated Rat-1 cells by time-dependent manner. Pretreatment with a caspase inhibitor (ZVAD-FMK) partially reduced the activation of caspase-3 in the TDH-treated cells. All of the changes found in this study appear to be linked, and the findings, especially activation of caspase-3 in TDH-treated Rat-1 cells, provide a new insight into TDH-mediated cytotoxicity.[...] Read More.
Keywords: Thermostable direct hemolysin (TDH), Vibrio parahaemolyticus, Rat-1 cells, actin disruption, caspase-3 activation, chromatin condensation.
  2020, 19(1), 1-6; 
Full text
Views:1034
Download:1442
Research Article
S. Bragadeeswaran*, R. Jeevapriya, K. Prabhu, S. Sophia Rani, S. Priyadharsini and T. Balasubramanian
Abstract: The aim of the study was to isolate the exopolysaccharides (EPS) from the active biofilm bacterium Bacillus cereus GU 812900 which was isolated from the stainless steel test panel and deployed in the Vellar estuary for a period of about four weeks. The deployed stainless steel test panels when analyzed revealed a direct relationship between the rate of corrosion and the concentration of EPS that is, the rate of corrosion increased with an increase in the concentration of EPS and the period of immersion. Growth and EPS production by B. cereus strain GU812900 was studied in a basalt salt solution (BSS) containing (g/1); NaCl, 30.0; KCl 0.75; MgSO4.7H2O, 7.0; NH4Cl, 1.0; K2HPO4, 0.7; KH2PO4. 0.3; glucose, 10.0 and 1 ml of trace metal solution. The rate of EPS production in batch cultures was highest during the late log phase of the growth then stationary phase. The EPS was recovered from the culture supernatant by using ethanol precipitation – dialysis procedure. Chemical composition of EPS revealed that it is primarily composed of natural sugars, proteins, phosphates and sulphates. The EPS production was influenced by carbon, nitrogen and phosphate concentrations in the growth medium. EPS produced by B. cereus GU812900 is a heteropolysaccharide which influence the corrosion. The FTIR analysis revealed the functional groups of the EPS. The results of the study was expressed the relationship between biocorrosion and biofilm formation of the stainless steel test panels. Key  words:  Biofilm,  exopolysaccharides  (EPS),  sequencing,  secondary  metabolite,  characterization, FTIR analysis.[...] Read More.
Keywords:
  2020, 19(1), 1-6; 
Full text
Views:1116
Download:1402
Research Article
Mulissa Jida,* and Fassil Assefa
Abstract: Lentil (Lens culnaris Medik.) is an invaluable source of protein for the vast majority of Ethiopian people. It also maintains soil fertility through symbiotic nitrogen-fixation in association with Rhizobium leguminosarum bv. viciae. The aim of this study was selecting symbiotically efficient native lentil nodulating rhizobia endowed with different plant growth-promoting (PGP) characteristics. Hence, 30 lentil nodulating rhizobial isolates were isolated from soils collected from different farmer fields found in Central and Northern parts of the country. All isolates were characterized based on morphological, physiological, symbiotic and PGP characteristics. The result of this study showed that these isolates have exhibited interesting features such as wide range of carbon-sources and nitrogen sources utilization, tolerance to acidic and alkaline pH, metal toxicity and antibiotics. Symbiotic characterization indicated that all tested isolates have showed great diversity in their capacity to nodulate their host plant and produce shoot dry matter yield under glasshouse conditions. In addition, they showed PGP characteristics such as IAA production and inorganic phosphate solubilization. Out of all tested isolates 36.7% of them were IAA producer while only 16.7% were insoluble inorganic phosphate solubilizer. In general, from the present study, it can be concluded that Ethiopian soils harbor highly efficient nitrogen-fixing lentil nodulating rhizobia which are diverse in their morphological, physiological and symbiotic characteristics.[...] Read More.
Keywords: Lentil, Rhizobium, Ethiopia, IAA production, phosphate solubilization.
  2020, 19(1), 1-6; 
Full text
Views:979
Download:1249
Research Article
Full Length Research Paper
Abstract: GB virus C (GBV-C)/hepatitis G virus (HGV) by infecting and encourage proliferative process of the mononuclear cells, may implicate in lymphomagenesis including non-Hodgkin’s lymphoma (NHL). Therefore, in this study the prevalence of GBV-C/HGV and HBV infections were evaluated in patients with NHL and controls. In a cross sectional study, blood samples were collected from 70 patients with NHL and 100 healthy controls. The infective markers of GBV-C/HGV and HBV viruses were evaluated in both studied groups by enzyme-linked immunosorbent assay (ELISA) and polymerase chain reaction (PCR) protocols, respectively. Anti-E2-Ab was detected in 1.4 of 70(1%) of NHL patients who has not the history of HBV infections. HGV-RNA was diagnosed in 2 of 70 (2.9%) of NHL patients and one of them was also shown the history of HBV infection. HGV-RNA was diagnosed in 1of 100 (1%) of controls but none of them was shown seroconversion to GBV-C/ HGV. HBV-DNA was found in 8 of 70 (11.6%) of NHL patients and 2 of 100 (2%) of controls. Significant differences were found in the prevalence of: HBV-DNA (P=0.013), HBsAb (P=0.001), and HBc-IgG-Ab (P=0.002) between NHL and controls. Determination of active and persistent infections of GBV-C/ HGV with or without HBV infection in NHL patients compared with control population proposed an association between viral hepatitis infections and NHL.[...] Read More.
Keywords: Non-Hodgkin’s lymphoma (NHL), GB virus C (GBV-C), hepatitis G virus (HGV).
  2020, 19(1), 1-6; 
Full text
Views:1006
Download:1361
Research Article
A. E. Ajiboye*, O. M. Kolawole, T. O. Oladosu, M. R. Adedayo and J. K. Akintunde
Abstract: Dried meat (Tinko) samples obtained from the Oja-Oba market in Ilorin metropolis during the rainy season were investigated for their microbial flora and the sensitivity of the bacterial isolates to different chemotherapeutic antibiotics under two different storage conditions (Cupboard and Refrigerator) for a period of five weeks revealed that the moisture content of dried meat samples stored in the cupboard increased from 35 to 65%, while those in the refrigerator had an initial increase from 50 to 55% for the first two weeks of storage and became constant through the period of storage. Bacteria and Fungi isolated include Staphylococcus aureus, Micrococcus luteus, Neisseria sp., Acinetobacter sp., Aspergillus niger, Aspergillus flavus, Penicillium sp. and Rhizopus sp. Bacterial isolates showed resistance to selected antibiotics (erythromycin, tetracycline, chloramphenicol, gentamycin, streptomycin, ofloxacin, nitrofurantoin, ciprofloxacin, azithromycin and clindamycin) except for Neisseria sp. which was sensitive to the antibiotics. The total bacterial count increased in the dried meat stored in the cupboard (2.5 × 107 to 3.3 × 107 cfu/ml) while it decreased in the meat samples stored in the refrigerator (2.0 × 107 to 1.4 × 107 cfu/ml).[...] Read More.
Keywords: Antibiotics, dried meat, bacteria, fungi, storage.
  2020, 19(1), 1-6; 
Full text
Views:1116
Download:1293
Research Article
N. Sri Kumaran, S. Bragadeeswaran* and S. Thangaraj
Abstract: The aim of this study was to screen the presence of antimicrobial activities in the marine mollusc Thais tissoti and Babylonia spirata. In this study, the human bacterial pathogen Klebsiella pneumonia (10.02 ± 0.11 mm) and fungal pathogen Aspergillus niger (12.09 ± 0.06 mm) showed most sensitive to ethyl acetate extracts of T. tissoti. In B. spirata extracts, bacterial pathogen Proteus mirabilis (7.02 ± 0.04 mm) and fungal pathogen Candida albicans (8.13 ± 0.15* mm) exhibit high zone of inhibition against n-butanol extracts. Among the fish bacterial pathogens assayed, Aeromonas hydrophila (9.22 ± 0.03* mm) and fungal pathogen Ichthyophonus sp. (5.21 ± 0.11 mm) showed more sensitivity to n- butanol extract of T. tissoti. In B. spirata extracts, bacterial pathogen A. hydrophila (11.2 ± 0.6* mm) and fungal pathogens A. niger (15.12 ± 0.23* mm) showed most sensitive to n-butanol extracts. From biofilm bacteria, Micrococcus luteus (7.02 ± 0.11* mm), Micrococcus sp. (7.25 ± 0.03* mm) showed high sensitivity to n-butanol extracts of molluscs T. tissoti and B. spirata. These results signify that the marine mollusc extracts express remarkable antimicrobial activity against isolated microbes. The result strongly suggests that the molluscs extracts can be used as antimicrobial agents and further studies for purification and structural elucidation of antimicrobial drugs.[...] Read More.
Keywords: Antibacterial, antifungal, human pathogen, fish pathogen, biofilm, marine mollusks.
  2020, 19(1), 1-6; 
Full text
Views:1123
Download:1358
Research Article
Rose Koffi-Nevry*, Ama Lethicia Manizan, Kablan Tano, Yao Clément Yué Bi, Mathias K. Oulé and Marina Koussémon
Abstract: The antifungal activity of the Polyhexamethylene-guanidine hydrochloride (PHMGH)-based disinfectant against fungi isolated from papaya fruit was evaluated. The aim of this work was to show that the PHMGH can be used as a disinfectant for papaya preservation. Thirty one strains of fungi were isolated as Mucor sp., Botrytis sp., Penicillium sp., Geotrichum sp., Aspergillus sp. and Colletotrichum sp. Mucor sp. was the most isolated with a frequency of 52.77% followed by Botrytis (47.22%), Aspergillus and Penicillium (8.33%), Colletotrichum (5.56%) then, Geotrichum (2.78%). The antifungal activity of the PHMGH was tested through the determination of the minimal inhibitory concentrations (MICs) and the minimal fungicidal concentrations (MFCs). All the strains tested were sensitive to the disinfectant. However, the activity of PHMGH varies according to the strain tested. The values of the MIC and the MFC were between[...] Read More.
Keywords: Antifungal activity, minimum inhibitory concentrations (MICs), minimum fungicidal concentrations (MFCs), papaya preservation, polyhexamethylene-guanidine hydrochloride.
  2020, 19(1), 1-6; 
Full text
Views:1083
Download:1338
Research Article
Salari Hassan*, Afzali Daryoush and Oliaie Mohammad Sadegh
Abstract: Bioremediation is a simple and effective technology for metal extraction from low-grade contaminated soils and mineral concentrates. Metal remove from sulfide minerals is based on the activity of mesophilic and chemolithotrophic bacteria, mainly ACIDITHIOBACILLUS FERROOXIDANS which convert insoluble metal sulfides into soluble metal sulfates. In this study bioremediation experiments carried out in 1 L Erlenmeyer flasks containing 300 ml basal medium of A. FERROOXIDANS and 5% (w/v) PbS with 45 and 75 meshes and also this condition repeated for ACIDITHIOBACILLUS THIOOXIDANS. The results showed that A. FERROOXIDANS had grown on the galena and obtained energy from it. Also, the galena was oxidized to form lead sulfate. The most important species for oxidizing galena concentrate showed A. FERROOXIDANS, because these species were more effective than A. THIOOXIDANS in our bioremediation experiments. Anglesite (PbSO4) was the important product of the galena bacterial oxidation. In these experiments the highest quantity of dissolute lead was 34% approximately in A. FERROOXIDANS cultures. The low solubility of lead sulphate indicated that this process is not commercially feasible for the recovery of lead on mines. In view of these results, bioremediation appears to have some potential for remediation of Pb contaminated soils.[...] Read More.
Keywords: Galena, acidithiobacillus ferrooxidans, acidithiobacillus thiooxidans, Ganat Marvan.
  2020, 19(1), 1-6; 
Full text
Views:1097
Download:1330
Research Article
F. Mollaamin*, Sh. Momeni, M. Movahedi and M. Monajjemi
Abstract: Carbon nanotubes (CNTs) are very common in medical research and are being highly studied in the fields of biosensing methods for disease treatment and efficient drug delivery and health monitoring. The transportation of open-end Single wall carbon nanotube (SWCNT) through the cell membrane widely investigated because of many advantages. In our recent study, extensive quantum mechanical (QM) calculation of electronic structure of open-end of SWCNT and transportation of single wall carbon nanotube through the cell membrane have been administered in vacuum media using GAUSSIAN 98 software. Our results manifested that the interaction of open-end of SWCNT has minimum value of energy interaction and then most structural stability in vacuum. We assayed effects of vacuum on transportation of SWCNT through the cell membrane with using B1LYP and Hartree Fock (HF) methods at STO-3G, 3-21G, 6-31G levels of theory. Also, we demonstrated the total atomic charges of dense region calculated STO-3G, 3-21G and 6-31G basis sets in vacuum with HF method. The calculated values showed negative charge at this site. The O and S atoms at interaction site produced negative charge because they have high electron affinity.[...] Read More.
Keywords: Single wall carbon nanotube (SWCNT), quantum mechanical (QM), STO-3G, 3-21G and 6-31G basis.
  2020, 19(1), 1-6; 
Full text
Views:1102
Download:1351
Research Article
S.  Vatandour*, M. Bozorgmehrifard, H. Shoushtari, S. Charkhkar and S. Bakhtiari
Abstract: Avian influenza (AI) outbreaks due to H9N2 subtype of avian influenza virus (AIV) occurred in poultry industry in Iran, throughout the past decade and caused serious economic losses as a result of decreased egg production, increased mortality and the cost of vaccination in Iranian poultry industry. Our aim was to find the phylogenic and genetic relationships among avian influenza viruses recently isolated from poultry in Iran with other Asian H9N2 lineages (1998-2007). The complete nucleotide sequences of the neuraminidase (NA) genes of ten H9N2 influenza virus strain isolated from diseased chickens in different farms in Iran during 1998-2007, were amplified and sequenced and phylogenetic relationships between these and previously reported N2 genes were investigated. The viruses surface glycoprotein genes was >90% similar to those of A/Quail/Hongkong/G1/97 (H9N2) lineage. The NA stalks regions in these viruses had no deletion or insertion or shortening as compared to that A/DK/HK/Y280/97 lineage (CK/Bei-like viruses) and the 2 human isolates A/HK/1073/99, A/HK/1074/99. The hemadsorbing site of NA had up to 3 amino acid substitution and is different from those of earlier Iranian viruses and ten Iranian isolates possessed seven potential glycosylation sites like the most H9N2 isolates. Phylogenetic analysis of NA gene showed that they belonged to the same A/Quail/Hong Kong/G1/97 like virus sub lineage.[...] Read More.
Keywords: Avian influenza virus, A/Quail/Hongkong/G1/97 (H9N2), neuraminidase gene, phylogenetic analysis, Iran.
  2020, 19(1), 1-6; 
Full text
Views:1100
Download:1346
Research Article
Najmedin Mortazavi, Rouh-Angiz Naderi, Nasrin Majidian, Behjat Naderi and Yavar Sharafi*
Abstract: Flowering is a complex morphological happening that occurs in apical meristem of stem. This investigation was carried out to study the effects of two hormones including gibberellin (GA) and benzyl adenine (BA) on calla cut flower production. The rhizomes were dipped in GA solution with concentrations include (0, 100, 200 and 500 ppm). BA with concentrations (0, 100, 200 and 500 ppm) was sprayed on flowering stems until flowering time. The results showed that maximum flower yield was obtained in GA solution with concentrations of 500 ppm followed by BA solutions (200 and 500 ppm). However; flowering in control plants was occurred earlier than other plants. Maximum flower weight (54/97 gr) was observed in treatment 200 ppm GA followed by 0 ppm BA and application of 500 ppm GA and 500 ppm BA resulted to minimum flower weight (38/09 gr). Interaction effects of two hormones were significant on chlorophyll content. The maximum chlorophyll content was observed when 500 ppm gibberellins and 500 ppm benzyl adenine were applied in the same time.[...] Read More.
Keywords: Calla lily, gibberellin, benzyl adenine, flower yield, chlorophyll content.
  2020, 19(1), 1-6; 
Full text
Views:1252
Download:1356
Research Article
Rathod D. P., Brestic M., and Shao H. B., *
Abstract: Arbuscular mycorrhizal fungi, namely, Glomus mosseae and Glomus intraradices, and an endophyte, Piriformospora indica was used to assess the growth of two varieties (JS 335 and TAMS 98-21) of soybean (Glycine max L.) subjected to drought stress. Chlorophyll a fluorescence was measured by Handy PEA (plant efficiency analyzer) and analyzed by Biolyzer programme. The JIP-test (Chlorophyll a fluorescence rise at J I and P steps) was applied to evaluate in vivo vitality based on in vivo biospectroscopy, which supplied images, spectra and kinetics.We report that in JS-335 variety of soybean, G. intraradices induced the highest drought resistance followed by G. mosseae and P. indica, whereas in TAMS 98-21 variety, G. mosseae induced highest drought resistance followed by G. intraradices and P. indica.[...] Read More.
Keywords: Glomus mosseae, Glomus intraradices, Piriformospora indica, Glycine max L., arbuscular mycorrhizal.
  2020, 19(1), 1-6; 
Full text
Views:1154
Download:1464
Research Article
Marlete Brum Cleff, Iara Wendisch, Angela L. Cabana, Maria Regina Rodrigues, João Roberto Braga de Mello, Mário Carlos Araújo Meireles and Jesús Jaime Hernández-Escareño*
Abstract: The aim of this work was evaluate action of oregano (Origanum vulgare) essential oil in treatment of experimental vaginal candidiasis. A batch of 50 Wistar rats was randomly allocated into four experimental groups corresponding to treatments: T1, 1.5% oil; T2, 3% oil; T3, Nystatin and T4, control treatment (emulsion). Oil concentrations were emulsified in agar suspension at 0.8%. Vulvovaginal candidiasis was established in ovariectomized and estrus-induced rats by intravaginal inoculation of Candida albicans (106 cells-ml). Experimental rats were treated intravaginally daily for a period of 30 days and tested for clinical and hematological parameters, agent retro isolation and macroscopic alterations. Rats from T4 (Negative) treatments did exhibit major alterations exhibited in clinical parameters major alterations. Macroscopic lesions were evident in animals T1 and T4, e.g. erythema, white spots and vaginal mucosa ulcerations; two rats from T4 and one from T1 showed an enhanced uterine volume. Colony counts (UFCs) at the end of experimental period were of 3.1, 2 and 6.5 log2 for T1, T2 and T4, respectively. T3 showed the lowest UFC value of 0.5 log. Experimental results, considered as preliminary, showed a good performance for 3% O. vulgare essential oil formulation on the control of experimental vaginal candidiasis.[...] Read More.
Keywords: Vaginal candidiasis, essential oil, Origanum.
  2020, 19(1), 1-6; 
Full text
Views:1205
Download:1403
Research Article
Anna Ilyina*, Anita J. Casas-Reyes, Karla M. Gregorio-Jauregui, Erika Nava-Reyna, Jose L. Martinez-Hernandez, Nagamani Balagurusamy, Federico Cerda-Ramirez and Yolanda Garza-Garcia
Abstract: The present study focuses on the improvement of limitations of the bioluminescent ATP assay. An attempt was made to improve on the following: non-selective detection, limited cell population density quantification, and to distinguish between bioluminescent noises data and cell ATP, as a suitable technique for coliforms and ESCHERICHIA COLI detection, as well as other cell strains. Results were achieved by combining growth kinetics of the cell population exponential phase, in 2% brilliant green lactose bile broth with bioluminescent assay, based on the reaction catalyzed by firefly luciferase. The equations applied to the description of kinetics on exponential growth phase were able to estimate the relative light units (RLU0) corresponding to initial adenosine triphosphate (ATP0) concentration. The developed equations also help to distinguish between background RLU and RLU0 corresponding to cell ATP, and to analyze the kinetics with and without lag period in order to estimate RLU0. The results demonstrated a good correlation with data obtained by standard methods for coliforms detection. The quantification of E. COLI and coliforms could be performed within a period of 6 h at 3.24 x 105 and 1.12 x 103 CFU/mL from the calculation of initial ATP concentrations at 19 and 0.067 pmol/mL, respectively. Monitoring of growth kinetic parameters along with the bioluminescent detection of microorganisms in the selective medium during shorter test time has potential for their selective and sensitive quantification. The mathematical approach may be extended to the analysis of experimental data obtained by other techniques based on the cell metabolite detection.[...] Read More.
Keywords: Bioluminescence, coliforms, Escherichia coli, exponential phase of growth, adenosine triphosphate
  2020, 19(1), 1-6; 
Full text
Views:1204
Download:1325
Research Article
Zahedi, F., Heydari Nasrabadi, M.*, Tajabadi Ebrahimi, M. and Aboutalebi, H.
Abstract: The benefits of probiotic microorganisms have been tested in several studies and they show many positive effects on human health like reduction of serum cholesterol, stimulation of immune system and prevention or treatment of human infections. This study has shown the activity of Lactobacillus brevis and Lactobacillus plantarum isolated from Iranian traditional cheese on cutaneous wound and describes the difference in healing activity between these two Lactobacilli. Some strains of Lactobacillus isolated from traditional dairy products of Iran were investigated for exopolysaccharide (EPS) production using the phenol-sulfuric acid method. L. brevis and L. plantarum were selected because they have high exopolysaccharide (EPS) production. A full-thickness wound (1.5 × 1.5 cm) was made on the back of each rat (45 rats in 4 groups). Two groups, experimental 1 and experimental 2, were treated by L. brevis, and L. plantarum that were added to eucerin. A control group was treated with eucerin and a negative-control group, additionally, did not receive anything. On days 1, 3, 7, 14 and 21, the rats were killed and wound tissue samples were collected for histological and statistical studies. The percentage of wound healing and inflammation in the experimental groups on day 21, when compared with the control and negative control groups, were significant (p≤0.05). In contrast to the control and negative-control groups, the number of neutrophils in the experimental groups was reduced in the later phase of wound healing. The current study showed a significant reduction in inflammation and an acceleration of wound healing in wounds treated with Lactobacilli as compared to the control and negative control groups. Further studies are required to develop a mechanism of L. brevis and L. plantarum during wound healing.[...] Read More.
Keywords: Cutaneous wound, exopolysaccharide, Lactobacillus brevis, Lactobacillus plantarum.
  2020, 19(1), 1-6; 
Full text
Views:1170
Download:1334
Short Communication
Short Communication
Abstract: Q fever, caused by COXIELLA BURNETII, is a worldwide zoonosis that affects not wild animals but domestic animals throughout the world, except in New Zealand. Domestic ruminants are considered to be a major infection source of Q fever in humans. However, few studies on the prevalence of Q fever in humans or animals in Korea have been conducted. Thus, the aim of this study was to investigate the seroprevalence of Q fever in meat cattle and deer. Blood samples were collected from 1634 ruminants: 1000 cattle, 604 wapiti, and 30 sika deer. The blood samples were analyzed with CHEKIT Q fever ELISA kits. Thirteen of 1000 (1.3%) cattle, 10 of 604 (about 1.7%) wapiti, and 0 of 30 (0%) sika deer had antibodies against C. BURNETII. The prevalence of Q fever in this study was quite low. However, the public health implications of these findings are important, because they indicate that seropositive animals that are asymptomatic may be shedding C. BURNETII consistently. This condition could increase the risk of Q fever infection in Korea, especially because many Koreans habitually consume raw meat and drink deer blood.[...] Read More.
Keywords: Q fever, Coxiella burnetii, cattle, deer.
  2020, 19(1), 1-6; 
Full text
Views:1372
Download:1326
Review
Ramesh C. Kasana
Abstract: The environmental conditions on planet earth are extremely diverse, with enormous variations in pressure, pH, temperature and salt concentration. All these environments are inhabited by living organisms, particularly microorganisms which have adapted to the different extremes of environments. Among various extreme environments, low temperature is very common both in natural and man-made environments. Low temperature environment is a source for the isolation of cold adapted enzymes of commercial and industrial importance. In the recent past, metagenomics have been employed as a powerful approach for the isolation of novel genes, enzymes and bioactive molecules from the yet to be cultured component of microbial communities prevailing in various environments.[...] Read More.
Keywords: Metagenomics, cold environment, microorganism, enzyme.
  2020, 19(1), 1-6; 
Full text
Views:1723
Download:1790
Review
Ana Niurka Hernández-Lauzardo*, Miguel Gerardo Velázquez-del Valle and María Guadalupe Guerra-Sánchez
Abstract: Chitosan is a deacetylated derivative of chitin, consisting mainly of glucosamine units, commercially obtained from crustacean waste. This natural compound is biodegradable and nontoxic and has diverse applications in agriculture, among which highlights the control of fungal diseases in crops of agricultural interest. This review focuses on some basic studies about the mode of action and the effect of chitosan on different phytopathogens fungi. In general, it is known that molecules of this polymer can act on extracellular (plasma membrane) and intracellular level (penetration of chitosan into the fungal cell). The study of the effect of chitosan on different phytopathogens fungi evidence that the response is variable; in some investigations, it was found that the spores are more sensitive than hyphae to the application of chitosan. Even though the progress in understanding the mode of action of this polymer and the various effects that can cause damage are known, it is necessary to carry out more studies about the biological activity of these molecules to propose better control strategies of the phytopathogens fungi.[...] Read More.
Keywords:
  2020, 19(1), 1-6; 
Full text
Views:1140
Download:1330
Review
Congbin Yao, Caixia Zhu, XueYin Pan, Xiuguo Hua and Congli Yuan*
Abstract: The genus Bartonella is comprised of 20 species and subspecies, in which 10 species are responsible for human infections. The identification of the causative agent of cat-scratch disease, bacillary angiomatosis, urban trench fever, and Carrion's disease has raised the emerging medical importance of Bartonella spp. This article provides an overview of bartonellosis with emphasis on its prevalence in China.[...] Read More.
Keywords: Bartonella, cat-scratch disease, wild animal, prevalence.
  2020, 19(1), 1-6; 
Full text
Views:1127
Download:1397
Research Article
Boualleg C., Kaouachi N., Seridi M., Ternango S. and Bensouilah M. A.
Abstract: A parasitic copepods study of Algerian teleost fish, report 25 copepod species belonging to eight families harvested from the gills of 14 fish species. The analysis of species richness according to some ecological, biological and taxonomical variables (Diet, Displacement, Way of life, Family) of the whole of hosts are reported in this study, the differences between mean specific richness (MSR) of all variables is statically significant according to Kruskal-Walis test using sigma stat software. Parasitic specificity is discussed, infestation parameters were described.[...] Read More.
Keywords: Gulf of Annaba, copepods, species richness, parasitic indices, parasitic ecology, teleost fishes.
  2020, 19(1), 1-6; 
Full text
Views:1222
Download:1376
Research Article
Bin Li, Rongrong Yu, Qiaomei Tang, Ting Su, Xiaoling Chen, Bo Zhu, Yanli Wang, Guanlin Xie and Guochang Sun*
Abstract: The potential of biofilm formation of 16 Paenibacillus strains and their inhibitory effect against bacterial wilt of tomato seedlings were examined in this study. The crystal violet assay indicated that all strains of Paenibacillus except strain MB02-1202 formed biofilm after 96 and 144 h of incubation while there was not significant difference in biofilm formation between strains of Paenibacillus polymyxa and strains of Paenibacillus macerans. However, the increase level of biofilm formation was associated with the increase of the incubation time and the initial inoculum density. In addition, all Paenibacillus strains except strain MB02-428 reduced wilt incidence in tomato seedlings inoculated with Ralstonia solanacearum while the cell numbers of R. solanacearum in rhizosphere soil was reduced by all Paenibacillus strains compared to the pathogen control. In general, most strains of Paenibacillus were able to both form biofilm and protect tomato seedlings from bacterial wilt, indicating that biofilm formation may play an important role in the biocontrol of Paenibacillus. This is first study regarding the relationship between in vitro biofilm formation ability of Paenibacillus strains and their inhibitory activity against R. solanacearum.[...] Read More.
Keywords: Biofilm, Paenibacillus, Ralstonia solanacearum, tomato.
  2020, 19(1), 1-6; 
Full text
Views:1319
Download:1376
Subscribe Your Manuscript